Gorai.004G167100 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.004G167100 T250706_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G167100.1 MADF 65 148
Gorai.004G167100.2 MADF 65 148
Gorai.004G167100.3 MADF 65 148

Links

Other MADF family TFs
Other Gossypium raimondii TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.943
Cla021714 Citrullus lanatus Cla021714 N 0.894
29709.m001180 Ricinus communis 29709.m001180 N 0.936
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.926
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.894
mgf005560m Mimulus guttatus mgf005560m N 0.849
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.859
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.877
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.883
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.883
Ca_06795 Cicer arietinum Ca_06795 N 0.908
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.927
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.924
MDP0000557282 Malus domestica MDP0000557282 N 0.910
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.943
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.937
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.902
PK17306.1 Cannabis sativa PK17306.1 N 0.908
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.936
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.836
Bo3g037360 Brassica oleracea Bo3g037360 N 0.883
Bo4g023990 Brassica oleracea Bo4g023990 N 0.846
Bra000360 Brassica rapa Bra000360 N 0.883
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.877
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.908
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.885
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.879
GLYMA19G29640 Glycine max GLYMA19G29640 N 0.818
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.836
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.877
GSMUA_Achr11G17710_001 Musa acuminata GSMUA_Achr11G17710_001 N 0.812
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.916
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.812
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.939
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.940
TCM_005773 Theobroma cacao TCM_005773 N 0.968
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.891
Ca_06067 Cicer arietinum Ca_06067 N 0.876