chr4.CM0739.40.nd (Lotus japonicus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 chr4.CM0739.40.nd T251205_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0739.40.nd MADF 29 112

Links

Other MADF family TFs
Other Lotus japonicus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.888
PK17306.1 Cannabis sativa PK17306.1 N 0.884
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.861
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.892
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.891
MDP0000557282 Malus domestica MDP0000557282 N 0.898
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.936
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.901
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.866
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.891
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.823
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.823
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.842
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.835
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.902
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.879
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.842
Cla021714 Citrullus lanatus Cla021714 N 0.902
Ca_06795 Cicer arietinum Ca_06795 N 0.892
Ca_06067 Cicer arietinum Ca_06067 N 0.881
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.824
TCM_005773 Theobroma cacao TCM_005773 N 0.936
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.892
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.892
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.825
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.912
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.875
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.878
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.892
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.842
Bra000360 Brassica rapa Bra000360 N 0.823
Bo3g037360 Brassica oleracea Bo3g037360 N 0.823