HPLM_0001751701 (Haemonchus placei)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 HPLM_0001751701 T252085_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-5
M02276_2.00 		Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN		 PBM
Weirauch et al.(2014)
pTH9076 		0.844 0.747
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0001751701-mRNA-1 MADF 11 93

Links

Other MADF family TFs
Other Haemonchus placei TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
madf-5 Caenorhabditis elegans WBGene00007242 D 0.844
DICVIV_11545 Dictyocaulus viviparus DICVIV_11545 I 0.951
TELCIR_10199 Teladorsagia circumcincta TELCIR_10199 I 0.968
SVUK_0001242901 Strongylus vulgaris SVUK_0001242901 I 0.961
OESDEN_24138 Oesophagostomum dentatum OESDEN_24138 I 0.948
OESDEN_17669 Oesophagostomum dentatum OESDEN_17669 I 0.957
NECAME_12942 Necator americanus NECAME_12942 I 0.961
HCOI02134900 Haemonchus contortus HCOI02134900 I 0.971
CBG20858 Caenorhabditis briggsae CBG20858 I 0.843
CGOC_0000285301 Cylicostephanus goldi CGOC_0000285301 I 0.959
ANCCAN_12875 Ancylostoma caninum ANCCAN_12875 I 0.961
ACAC_0000281001 Angiostrongylus cantonensis ACAC_0000281001 I 0.944
CRE26355 Caenorhabditis remanei CRE26355 I 0.844
CJA18506 Caenorhabditis japonica CJA18506 I 0.844
CBN31453 Caenorhabditis brenneri CBN31453 I 0.844
CBN17510 Caenorhabditis brenneri CBN17510 I 0.844
PTRK_0000042600 Parastrongyloides trichosuri PTRK_0000042600 N 0.818
RSKR_0000405100 Rhabditophanes kr3021 RSKR_0000405100 N 0.818