CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra024521
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra024521
T253317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024521.1-P
MADS box
10
54
LISDNATRRVTFRKRKHGLLKKLNELTILCGLRACAIIYSDYEEG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa007578mg
Prunus persica
PRUPE_ppa007578mg
I
Pm002037
Prunus mume
Pm002037
I
PK11776.1
Cannabis sativa
PK11776.1
I
POPTR_0005s08370
Populus trichocarpa
POPTR_0005s08370
N
cassava20419.m1
Manihot esculenta
cassava20419.m1
N
gene31621-v1.0-hybrid
Fragaria vesca
gene31621-v1.0-hybrid
N
Lus10011445.g
Linum usitatissimum
Lus10011445.g
N
Lus10035873.g
Linum usitatissimum
Lus10035873.g
N
Lus10037550.g
Linum usitatissimum
Lus10037550.g
N
MDP0000274723
Malus domestica
MDP0000274723
N
SapurV1A.1429s0020
Salix purpurea
SapurV1A.1429s0020
N