CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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G210_1171
(
Candida maltosa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
G210_1171
T254060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA
TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.812
0.812
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.812
0.812
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.771
0.771
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMG48270
MADS box
10
57
PLKDERNRTVTFVKRKAGLFKKAHELAVLCQVDLAVIIVGSNNKVYEF
Links
Other
MADS box
family TFs
Other
Candida maltosa
TFs
163 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_926-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_926-fgenesh-gene-0.0
N
0.000
gw1.23.237.1
Phytophthora capsici
gw1.23.237.1
N
0.000
PYU1_G008786
Pythium ultimum
PYU1_G008786
N
0.000
PITG_12841
Phytophthora infestans
PITG_12841
N
0.000
Physo143270
Phytophthora sojae
Physo143270
N
0.000
Phyra75006
Phytophthora ramorum
Phyra75006
N
0.000
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
0.000
maker-piw_contig_496-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_496-snap-gene-0.3
N
0.000
maker-piw_contig_1851-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1851-snap-gene-0.3
N
0.000
fgenesh-pir_contig_1013-abinit-gene-0.11
Pythium irregulare
fgenesh-pir_contig_1013-abinit-gene-0.11
N
0.000
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
0.000
maker-par_contig_6341-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6341-snap-gene-0.1
N
0.000
maker-par_contig_4456-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_4456-fgenesh-gene-0.0
N
0.000
maker-pag1_scaffold_571-snap-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_571-snap-gene-0.7
N
0.000
maker-pag1_scaffold_26-snap-gene-0.61
Pythium aphanidermatum
maker-pag1_scaffold_26-snap-gene-0.61
N
0.000
maker-pag1_scaffold_26-snap-gene-0.60
Pythium aphanidermatum
maker-pag1_scaffold_26-snap-gene-0.60
N
0.000
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
0.000
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
0.000