CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA18G05990
(
Glycine max
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GLYMA18G05990
T254231_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA18G05990.2
MADS box
10
58
FIANDTERKTSYKKRKKSLLKKTEELSTLCGIEACAIVYGPDDPQPETW
Links
Other
MADS box
family TFs
Other
Glycine max
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g104810
Brassica oleracea
Bo2g104810
I
0.708
Bra018490
Brassica rapa
Bra018490
I
0.708
GLYMA11G33460
Glycine max
GLYMA11G33460
I
0.733
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.708
Lus10014578.g
Linum usitatissimum
Lus10014578.g
I
0.729
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.750
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.708
GLYMA18G05916
Glycine max
GLYMA18G05916
N
0.756
GLYMA18G05963
Glycine max
GLYMA18G05963
N
0.729
GLYMA18G05976
Glycine max
GLYMA18G05976
N
0.729