CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g105920
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_1g105920
T254719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH43980
MADS box
17
64
KMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
262 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10000178m.g
Citrus clementina
Ciclev10000178m.g
N
0.000
Traes_4DL_E88B8B0F6
Triticum aestivum
Traes_4DL_E88B8B0F6
N
0.000
TRIUR3_21153
Triticum urartu
TRIUR3_21153
N
0.000
VIT_14s0060g02420
Vitis vinifera
VIT_14s0060g02420
N
0.000
Ca_03676
Cicer arietinum
Ca_03676
N
0.000
Pm003293
Prunus mume
Pm003293
N
0.000
30128.m008807
Ricinus communis
30128.m008807
N
0.000
cassava22130.valid.m1
Manihot esculenta
cassava22130.valid.m1
N
0.000
Cucsa.091190
Cucumis sativus
Cucsa.091190
N
0.000
mgf016253m
Mimulus guttatus
mgf016253m
N
0.000
Aquca_016_00289
Aquilegia coerulea
Aquca_016_00289
N
0.000
Bostr.25219s0040
Boechera stricta
Bostr.25219s0040
N
0.000
Cagra.4395s0091
Capsella grandiflora
Cagra.4395s0091
N
0.000
Carubv10011895m.g
Capsella rubella
Carubv10011895m.g
N
0.000
Traes_4BS_BDBC1B1FA
Triticum aestivum
Traes_4BS_BDBC1B1FA
N
0.000
evm.TU.supercontig_48.77
Carica papaya
evm.TU.supercontig_48.77
N
0.000
gene22503-v1.0-hybrid
Fragaria vesca
gene22503-v1.0-hybrid
N
0.000
Gorai.004G240400
Gossypium raimondii
Gorai.004G240400
N
0.000
Lus10017092.g
Linum usitatissimum
Lus10017092.g
N
0.000
Lus10037812.g
Linum usitatissimum
Lus10037812.g
N
0.000
orange1.1g002177m.g
Citrus sinensis
orange1.1g002177m.g
N
0.000
Pavir.J33002
Panicum virgatum
Pavir.J33002
N
0.000
SapurV1A.0066s0380
Salix purpurea
SapurV1A.0066s0380
N
0.000
SapurV1A.0424s0260
Salix purpurea
SapurV1A.0424s0260
N
0.000
Thhalv10006723m.g
Eutrema salsugineum
Thhalv10006723m.g
N
0.000
PK22697.1
Cannabis sativa
PK22697.1
N
0.000
chr5.CM0299.460.nd
Lotus japonicus
chr5.CM0299.460.nd
N
0.000
PDK_20s1361681g001
Phoenix dactylifera
PDK_20s1361681g001
N
0.000
OMERI03G15300
Oryza meridionalis
OMERI03G15300
N
0.000
AT1G09060
Arabidopsis thaliana
AT1G09060
N
0.000
Bo8g058150
Brassica oleracea
Bo8g058150
N
0.000
Bra030754
Brassica rapa
Bra030754
N
0.000
BRADI1G62640
Brachypodium distachyon
BRADI1G62640
N
0.000
F775_27911
Aegilops tauschii
F775_27911
N
0.000
fgenesh2_kg.1__941__AT1G09060.2
Arabidopsis lyrata
fgenesh2_kg.1__941__AT1G09060.2
N
0.000
GLYMA10G29371
Glycine max
GLYMA10G29371
N
0.000
GLYMA20G37910
Glycine max
GLYMA20G37910
N
0.000
GRMZM2G428933
Zea mays
GRMZM2G428933
N
0.000
LPERR03G14970
Leersia perrieri
LPERR03G14970
N
0.000
MLOC_15207
Hordeum vulgare
MLOC_15207
N
0.000
MTR_1g083120
Medicago truncatula
MTR_1g083120
N
0.000
OGLUM03G17600
Oryza glumaepatula
OGLUM03G17600
N
0.000
AMTR_s00057p00206860
Amborella trichopoda
AMTR_s00057p00206860
N
0.000
ONIVA03G18210
Oryza nivara
ONIVA03G18210
N
0.000
ORGLA03G0163900
Oryza glaberrima
ORGLA03G0163900
N
0.000
ORUFI03G17780
Oryza rufipogon
ORUFI03G17780
N
0.000
OS03G0346700
Oryza sativa
OS03G0346700
N
0.000
PGSC0003DMG400022424
Solanum tuberosum
PGSC0003DMG400022424
N
0.000
POPTR_0005s02710
Populus trichocarpa
POPTR_0005s02710
N
0.000
POPTR_0013s01970
Populus trichocarpa
POPTR_0013s01970
N
0.000
PRUPE_ppa020523mg
Prunus persica
PRUPE_ppa020523mg
N
0.000
Sb01g035540
Sorghum bicolor
Sb01g035540
N
0.000
Si034162m.g
Setaria italica
Si034162m.g
N
0.000
Solyc02g078790.2
Solanum lycopersicum
Solyc02g078790.2
N
0.000
TCM_026634
Theobroma cacao
TCM_026634
N
0.000
Traes_4AS_93108583B
Triticum aestivum
Traes_4AS_93108583B
N
0.000