ONIVA04G08280 (Oryza nivara)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ONIVA04G08280 T255248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G08280.1 MADS box 11 60

Links

Other MADS box family TFs
Other Oryza nivara TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC001 Arabidopsis thaliana AT1G01010 D
NAC69 Arabidopsis thaliana AT4G01550 D
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I
BGIOSGA016546 Oryza indica BGIOSGA016546 I
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BGIOSGA027623 Oryza indica BGIOSGA027623 I
Bo00853s060 Brassica oleracea Bo00853s060 I
Bo5g002810 Brassica oleracea Bo5g002810 I
Bo5g002850 Brassica oleracea Bo5g002850 I
Bo6g119080 Brassica oleracea Bo6g119080 I
Bo9g004070 Brassica oleracea Bo9g004070 I
Bo9g004090 Brassica oleracea Bo9g004090 I
Bo9g004110 Brassica oleracea Bo9g004110 I
Bra008553 Brassica rapa Bra008553 I
Bra027596 Brassica rapa Bra027596 I
Bra033296 Brassica rapa Bra033296 I
Bra036328 Brassica rapa Bra036328 I
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I
F775_13961 Aegilops tauschii F775_13961 I
F775_30082 Aegilops tauschii F775_30082 I
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I
GLYMA12G31211 Glycine max GLYMA12G31211 I
GLYMA14G36840 Glycine max GLYMA14G36840 I
GRMZM2G003715 Zea mays GRMZM2G003715 I
GRMZM2G139700 Zea mays GRMZM2G139700 I
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I
LPERR04G11740 Leersia perrieri LPERR04G11740 I
LPERR08G03510 Leersia perrieri LPERR08G03510 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
MLOC_13932 Hordeum vulgare MLOC_13932 I
MLOC_37843 Hordeum vulgare MLOC_37843 I
MLOC_50406 Hordeum vulgare MLOC_50406 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_8g023840 Medicago truncatula MTR_8g023840 I
MTR_8g023860 Medicago truncatula MTR_8g023860 I
MTR_8g023930 Medicago truncatula MTR_8g023930 I
OB08G13730 Oryza brachyantha OB08G13730 I
OBART04G14970 Oryza barthii OBART04G14970 I
OBART08G03460 Oryza barthii OBART08G03460 I
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OLONG_000105 Oryza longistaminata OLONG_000105 I
OLONG_023103 Oryza longistaminata OLONG_023103 I
OMERI08G03500 Oryza meridionalis OMERI08G03500 I
ONIVA04G13100 Oryza nivara ONIVA04G13100 I
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
OPUNC08G03310 Oryza punctata OPUNC08G03310 I
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
OS04G0460600 Oryza sativa OS04G0460600 I
OS08G0157900 Oryza sativa OS08G0157900 I
OS08G0511200 Oryza sativa OS08G0511200 I
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I
Sb06g019010 Sorghum bicolor Sb06g019010 I
Sb07g003900 Sorghum bicolor Sb07g003900 I
Si010553m.g Setaria italica Si010553m.g I
Si013369m.g Setaria italica Si013369m.g I
Si032702m.g Setaria italica Si032702m.g I
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
TCM_015535 Theobroma cacao TCM_015535 I
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_32613 Triticum urartu TRIUR3_32613 I
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I
Ca_20988 Cicer arietinum Ca_20988 I
Ca_27204 Cicer arietinum Ca_27204 I
Pm019659 Prunus mume Pm019659 I
Pm028711 Prunus mume Pm028711 I
Pm028722 Prunus mume Pm028722 I
cassava29774.valid.m1 Manihot esculenta cassava29774.valid.m1 I
cassava29775.valid.m1 Manihot esculenta cassava29775.valid.m1 I
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
mgf022344m Mimulus guttatus mgf022344m I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Carubv10003260m.g Capsella rubella Carubv10003260m.g I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
Carubv10009451m.g Capsella rubella Carubv10009451m.g I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
MDP0000282616 Malus domestica MDP0000282616 I
MDP0000575835 Malus domestica MDP0000575835 I
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I
Bo5g002830 Brassica oleracea Bo5g002830 N
Bo5g002860 Brassica oleracea Bo5g002860 N
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N
MLOC_75297 Hordeum vulgare MLOC_75297 N
MTR_8g023880 Medicago truncatula MTR_8g023880 N
OPUNC06G00030 Oryza punctata OPUNC06G00030 N
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N
Bostr.15697s0466 Boechera stricta Bostr.15697s0466 N
Bostr.5325s0010 Boechera stricta Bostr.5325s0010 N
MDP0000136652 Malus domestica MDP0000136652 N
MDP0000182344 Malus domestica MDP0000182344 N
SapurV1A.0003s0310 Salix purpurea SapurV1A.0003s0310 N