CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAC001
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT1G01010
T292009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC001
M00969_2.00
Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN
PBM
Lindemose et al.(2014)
FL092
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.870
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00969_2.00
NAC/NAM
4
138
QVGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENNKGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEFHY
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G01010.1
NAC/NAM
4
138
QVGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENNKGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEFHY
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.899
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.899
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.891
GRMZM5G857701
Zea mays
GRMZM5G857701
I
0.891
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.889
Bra033298
Brassica rapa
Bra033298
I
0.888
GRMZM2G140901
Zea mays
GRMZM2G140901
I
0.884
LPERR02G30240
Leersia perrieri
LPERR02G30240
I
0.879
OGLUM02G38020
Oryza glumaepatula
OGLUM02G38020
I
0.879
Pavir.Aa00144
Panicum virgatum
Pavir.Aa00144
I
0.875
Pavir.J34679
Panicum virgatum
Pavir.J34679
I
0.875
Si017967m.g
Setaria italica
Si017967m.g
I
0.874
Traes_6BL_D00F04562
Triticum aestivum
Traes_6BL_D00F04562
I
0.874
Sb04g036640
Sorghum bicolor
Sb04g036640
I
0.873