PDE_01919 (Penicillium oxalicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PDE_01919 T255582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.708 0.708
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPS26979 MADS box 10 57

Links

Other MADS box family TFs
Other Penicillium oxalicum TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf024029m Mimulus guttatus mgf024029m I
mgf018455m Mimulus guttatus mgf018455m I
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I
MDP0000243628 Malus domestica MDP0000243628 I
Pm020879 Prunus mume Pm020879 I
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I
AMS Populus trichocarpa POPTR_0009s13860 I
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N
Bostr.7867s0840 Boechera stricta Bostr.7867s0840 N
Cagra.0268s0010 Capsella grandiflora Cagra.0268s0010 N
Thhalv10027332m.g Eutrema salsugineum Thhalv10027332m.g N
Carubv10006422m.g Capsella rubella Carubv10006422m.g N
Lus10030880.g Linum usitatissimum Lus10030880.g N
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N
BHLH27 Arabidopsis thaliana AT4G29930 N
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N
fgenesh2_kg.7__1196__AT4G29930.1 Arabidopsis lyrata fgenesh2_kg.7__1196__AT4G29930.1 N
Bra024115 Brassica rapa Bra024115 N
Bra020462 Brassica rapa Bra020462 N
Bra011152 Brassica rapa Bra011152 N
Bra006831 Brassica rapa Bra006831 N
Bra002756 Brassica rapa Bra002756 N
Bo9g130890 Brassica oleracea Bo9g130890 N
Bo7g114110 Brassica oleracea Bo7g114110 N
Bo3g019430 Brassica oleracea Bo3g019430 N
AT5G57150 Arabidopsis thaliana AT5G57150 N