Sb02g005005 (Sorghum bicolor)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Sb02g005005 T256039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.718 0.718
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.718 0.718
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.718 0.718
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.718 0.718
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.718 0.718
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.718 0.718
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.718 0.718
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.718 0.718
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g005005.1 MADS box 85 123

Links

Other MADS box family TFs
Other Sorghum bicolor TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HBP1 Homo sapiens ENSG00000105856 D
BBX Homo sapiens ENSG00000114439 D
Sox15 Drosophila melanogaster FBgn0005613 D
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I
WUBG_09252 Wuchereria bancrofti WUBG_09252 I
AAEL000792 Aedes aegypti AAEL000792 I
ACEP10855 Atta cephalotes ACEP10855 I
ACEP10859 Atta cephalotes ACEP10859 I
ACEP25857 Atta cephalotes ACEP25857 I
ACYPI006194 Acyrthosiphon pisum ACYPI006194 I
AGAP010923 Anopheles gambiae AGAP010923 I
AGAP012033 Anopheles gambiae AGAP012033 I
BGIBMGA003080 Bombyx mori BGIBMGA003080 I
BGIBMGA004367 Bombyx mori BGIBMGA004367 I
CapteG70604 Capitella teleta CapteG70604 I
CGI_10003991 Crassostrea gigas CGI_10003991 I
CPIJ012042 Culex quinquefasciatus CPIJ012042 I
CPIJ014424 Culex quinquefasciatus CPIJ014424 I
CPIJ017659 Culex quinquefasciatus CPIJ017659 I
DAPPUDRAFT_35405 Daphnia pulex DAPPUDRAFT_35405 I
SOX1 Anolis carolinensis ENSACAG00000006346 I
ENSAMEG00000016773 Ailuropoda melanoleuca ENSAMEG00000016773 I
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I
ENSCSAVG00000000494 Ciona savignyi ENSCSAVG00000000494 I
sox9b Danio rerio ENSDARG00000043923 I
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I
ENSDORG00000001450 Dipodomys ordii ENSDORG00000001450 I
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I
SOX6 Erinaceus europaeus ENSEEUG00000006749 I
SOX10 Erinaceus europaeus ENSEEUG00000011263 I
SOX6 Echinops telfairi ENSETEG00000001898 I
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I
SOX13 Felis catus ENSFCAG00000002900 I
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I
ENSMEUG00000014457 Macropus eugenii ENSMEUG00000014457 I
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I
SOX10 Meleagris gallopavo ENSMGAG00000012508 I
SOX13 Microcebus murinus ENSMICG00000009236 I
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I
ENSNLEG00000010228 Nomascus leucogenys ENSNLEG00000010228 I
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I
SOX10 Ochotona princeps ENSOPRG00000013575 I
SOX17 Procavia capensis ENSPCAG00000003188 I
SOX10 Procavia capensis ENSPCAG00000005913 I
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I
SOX3 Pteropus vampyrus ENSPVAG00000003166 I
SOX9 Pteropus vampyrus ENSPVAG00000010505 I
SOX5 Sorex araneus ENSSARG00000007963 I
SOX12 Sus scrofa ENSSSCG00000021920 I
SOX6 Tupaia belangeri ENSTBEG00000002476 I
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I
GA21052 Drosophila pseudoobscura FBgn0081040 I
GF12898 Drosophila ananassae FBgn0089932 I
GG22439 Drosophila erecta FBgn0114611 I
GH20045 Drosophila grimshawi FBgn0127509 I
GI20453 Drosophila mojavensis FBgn0143189 I
GL17288 Drosophila persimilis FBgn0154891 I
GM20225 Drosophila sechellia FBgn0175108 I
GJ22304 Drosophila virilis FBgn0209417 I
GK21748 Drosophila willistoni FBgn0223733 I
GE12330 Drosophila yakuba FBgn0230081 I
GB40960 Apis mellifera GB40960 I
HMEL016850 Heliconius melpomene HMEL016850 I
ISCW009925 Ixodes scapularis ISCW009925 I
L798_02392 Zootermopsis nevadensis L798_02392 I
L798_12045 Zootermopsis nevadensis L798_12045 I
LotgiG120517 Lottia gigantea LotgiG120517 I
LotgiG88815 Lottia gigantea LotgiG88815 I
MCINX002905 Melitaea cinxia MCINX002905 I
MCINX011114 Melitaea cinxia MCINX011114 I
MESCA000459 Megaselia scalaris MESCA000459 I
MESCA009852 Megaselia scalaris MESCA009852 I
NEMVEDRAFT_v1g163545 Nematostella vectensis NEMVEDRAFT_v1g163545 I
NV15963 Nasonia vitripennis NV15963 I
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I
RPRC012780 Rhodnius prolixus RPRC012780 I
RPRC014334 Rhodnius prolixus RPRC014334 I
SINV16626 Solenopsis invicta SINV16626 I
SINV19744 Solenopsis invicta SINV19744 I
SINV19753 Solenopsis invicta SINV19753 I
TC003791 Tribolium castaneum TC003791 I
TC009854 Tribolium castaneum TC009854 I
tetur03g05800 Tetranychus urticae tetur03g05800 I
YQE_08560 Dendroctonus ponderosae YQE_08560 I
YQE_13042 Dendroctonus ponderosae YQE_13042 I
Gfo_R009506 Geospiza fortis Gfo_R009506 I
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I
CLEC006959 Cimex lectularius CLEC006959 I
CLEC006961 Cimex lectularius CLEC006961 I
LCUP001585 Lucilia cuprina LCUP001585 I
XP_002935939 Xenopus tropicalis XP_002935939 I
AALB009865 Anopheles albimanus AALB009865 I
AALB009868 Anopheles albimanus AALB009868 I
AARA000827 Anopheles arabiensis AARA000827 I
AARA005391 Anopheles arabiensis AARA005391 I
AARA005393 Anopheles arabiensis AARA005393 I
AARA011914 Anopheles arabiensis AARA011914 I
ACHR009359 Anopheles christyi ACHR009359 I
ACOM022800 Anopheles coluzzii ACOM022800 I
ACOM022803 Anopheles coluzzii ACOM022803 I
ACOM034662 Anopheles coluzzii ACOM034662 I
ACUA008554 Anopheles culicifacies ACUA008554 I
ACUA026266 Anopheles culicifacies ACUA026266 I
ACUA026638 Anopheles culicifacies ACUA026638 I
ADIR005630 Anopheles dirus ADIR005630 I
ADIR005633 Anopheles dirus ADIR005633 I
ADIR009659 Anopheles dirus ADIR009659 I
AEPI003628 Anopheles epiroticus AEPI003628 I
AEPI010515 Anopheles epiroticus AEPI010515 I
AFAF017335 Anopheles farauti AFAF017335 I
AFUN009319 Anopheles funestus AFUN009319 I
AFUN010196 Anopheles funestus AFUN010196 I
AFUN010199 Anopheles funestus AFUN010199 I
AMAM006332 Anopheles maculatus AMAM006332 I
AMAM015893 Anopheles maculatus AMAM015893 I
AMAM018985 Anopheles maculatus AMAM018985 I
AMEC008804 Anopheles melas AMEC008804 I
AMEC012053 Anopheles melas AMEC012053 I
AMEC016085 Anopheles melas AMEC016085 I
AMEM010579 Anopheles merus AMEM010579 I
AMEM014190 Anopheles merus AMEM014190 I
AMIN001219 Anopheles minimus AMIN001219 I
AMIN008219 Anopheles minimus AMIN008219 I
AMIN009301 Anopheles minimus AMIN009301 I
AMIN009304 Anopheles minimus AMIN009304 I
AQUA001259 Anopheles quadriannulatus AQUA001259 I
AQUA001262 Anopheles quadriannulatus AQUA001262 I
AQUA004309 Anopheles quadriannulatus AQUA004309 I
ASTEI06407 Anopheles stephensi ASTEI06407 I
BGLB002734 Biomphalaria glabrata BGLB002734 I
BGLB010904 Biomphalaria glabrata BGLB010904 I
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I
MDOA011444 Musca domestica MDOA011444 I
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I
CGOC_0001130501 Cylicostephanus goldi CGOC_0001130501 I
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I
L898_g3197 Steinernema monticolum L898_g3197 I
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N
ACEP25270 Atta cephalotes ACEP25270 N
CPIJ012500 Culex quinquefasciatus CPIJ012500 N
CPIJ014016 Culex quinquefasciatus CPIJ014016 N
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N
ENSDNOG00000034433 Dasypus novemcinctus ENSDNOG00000034433 N
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N
SOX6 Procavia capensis ENSPCAG00000001398 N
SOX30 Procavia capensis ENSPCAG00000010619 N
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N
GLOINDRAFT_339213 Rhizophagus irregularis GLOINDRAFT_339213 N
GLYMA01G28253 Glycine max GLYMA01G28253 N
GRMZM2G144398 Zea mays GRMZM2G144398 N
GRMZM2G150348 Zea mays GRMZM2G150348 N
HelroG148277 Helobdella robusta HelroG148277 N
KGM_05609 Danaus plexippus KGM_05609 N
L798_04020 Zootermopsis nevadensis L798_04020 N
L798_09360 Zootermopsis nevadensis L798_09360 N
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N
ML23337a Mnemiopsis leidyi ML23337a N
MPER_07337 Moniliophthora perniciosa MPER_07337 N
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N
PHUM433270 Pediculus humanus PHUM433270 N
RPRC012125 Rhodnius prolixus RPRC012125 N
SEPMUDRAFT_152382 Sphaerulina musiva SEPMUDRAFT_152382 N
SMAR010127 Strigamia maritima SMAR010127 N
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N
LDEC007549 Leptinotarsa decemlineata LDEC007549 N
AATE006542 Anopheles atroparvus AATE006542 N
AATE012157 Anopheles atroparvus AATE012157 N
ACOM026664 Anopheles coluzzii ACOM026664 N
ACUA011783 Anopheles culicifacies ACUA011783 N
AEPI007651 Anopheles epiroticus AEPI007651 N
AEPI007946 Anopheles epiroticus AEPI007946 N
AMAM022760 Anopheles maculatus AMAM022760 N
ASIS016076 Anopheles sinensis ASIS016076 N
ASTEI06129 Anopheles stephensi ASTEI06129 N
PPAI008595 Phlebotomus papatasi PPAI008595 N
PPAI009257 Phlebotomus papatasi PPAI009257 N
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N
D918_08316 Trichuris suis D918_08316 N
NECAME_14932 Necator americanus NECAME_14932 N
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N