GRMZM2G150348 (Zea mays)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GRMZM2G150348 T330336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G150348_P01 Sox 46 81

Links

Other Sox family TFs
Other Zea mays TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.520
Si007288m.g Setaria italica Si007288m.g I 0.517
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.517
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.517
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.516
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.497
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.496
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.496
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.494
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.472
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.457
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.448
SOX17 Procavia capensis ENSPCAG00000003188 I 0.440
SMAR010127 Strigamia maritima SMAR010127 N 0.440
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.440
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.435
RPRC012125 Rhodnius prolixus RPRC012125 N 0.433
AARA000827 Anopheles arabiensis AARA000827 I 0.433
PHUM433270 Pediculus humanus PHUM433270 N 0.433
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.433
SINV16626 Solenopsis invicta SINV16626 I 0.433
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.433
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.433
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.433
ACOM026664 Anopheles coluzzii ACOM026664 N 0.433
HMEL016850 Heliconius melpomene HMEL016850 I 0.433
AGAP012033 Anopheles gambiae AGAP012033 I 0.433
ASIS016076 Anopheles sinensis ASIS016076 N 0.433
AMEC014560 Anopheles melas AMEC014560 I 0.433
ACEP25857 Atta cephalotes ACEP25857 I 0.433
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.433
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.433
AAEL000792 Aedes aegypti AAEL000792 I 0.433
AFUN009319 Anopheles funestus AFUN009319 I 0.433
ADIR009659 Anopheles dirus ADIR009659 I 0.433
KGM_05609 Danaus plexippus KGM_05609 N 0.433
GB40960 Apis mellifera GB40960 I 0.433
ACUA011783 Anopheles culicifacies ACUA011783 N 0.433
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.433
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.433
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.424
ADIR005630 Anopheles dirus ADIR005630 I 0.424
MESCA000459 Megaselia scalaris MESCA000459 I 0.424
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.424
SPOG_05006 Schizosaccharomyces cryophilus SPOG_05006 N 0.423
Bra012244 Brassica rapa Bra012244 N 0.421
Bra016455 Brassica rapa Bra016455 N 0.421
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.420
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.420
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.417
AMEM014190 Anopheles merus AMEM014190 I 0.417
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.417
AMIN009301 Anopheles minimus AMIN009301 I 0.417
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.417
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.417
ACEP10855 Atta cephalotes ACEP10855 I 0.417
LCUP001585 Lucilia cuprina LCUP001585 I 0.417
AMAM006332 Anopheles maculatus AMAM006332 I 0.417
ACUA008554 Anopheles culicifacies ACUA008554 I 0.417
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.417
ACOM022800 Anopheles coluzzii ACOM022800 I 0.417
MCINX002905 Melitaea cinxia MCINX002905 I 0.417
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.417
AARA005391 Anopheles arabiensis AARA005391 I 0.417
AALB009868 Anopheles albimanus AALB009868 I 0.417
AEPI003628 Anopheles epiroticus AEPI003628 I 0.417
AMEC012053 Anopheles melas AMEC012053 I 0.417