CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000303501
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000303501
T258734_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000303501
MADS box
150
194
LIPNESARKMAFRKRKKNVYKKADELSKLCDIDVALIVYEADQXK
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa013383mg
Prunus persica
PRUPE_ppa013383mg
N
0.778
PRUPE_ppa018410mg
Prunus persica
PRUPE_ppa018410mg
N
0.733
PRUPE_ppa023499mg
Prunus persica
PRUPE_ppa023499mg
N
0.711
PRUPE_ppa026256mg
Prunus persica
PRUPE_ppa026256mg
N
0.711
Pm025575
Prunus mume
Pm025575
N
0.711
Pm025576
Prunus mume
Pm025576
N
0.705
Pm025578
Prunus mume
Pm025578
N
0.711
Pm025614
Prunus mume
Pm025614
N
0.750
MDP0000185853
Malus domestica
MDP0000185853
N
0.909
MDP0000251651
Malus domestica
MDP0000251651
N
0.844