CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa018410mg
(
Prunus persica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PRUPE_ppa018410mg
T255921_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ04172
MADS box
11
58
LIPNEGTRKMTFRKRKKSIYKKADELSKLCDIDVCLIVYEADQKKGRA
Links
Other
MADS box
family TFs
Other
Prunus persica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa023499mg
Prunus persica
PRUPE_ppa023499mg
N
0.978
PRUPE_ppa026256mg
Prunus persica
PRUPE_ppa026256mg
N
0.978
Pm025575
Prunus mume
Pm025575
N
0.978
Pm025578
Prunus mume
Pm025578
N
0.978
Pm025630
Prunus mume
Pm025630
N
0.972
Pm025576
Prunus mume
Pm025576
N
0.933
PRUPE_ppa013383mg
Prunus persica
PRUPE_ppa013383mg
N
0.889
Pm025614
Prunus mume
Pm025614
N
0.889
MDP0000185853
Malus domestica
MDP0000185853
N
0.756
MDP0000303501
Malus domestica
MDP0000303501
N
0.733