CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm025630
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm025630
T257086_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm025630
MADS box
1
39
MTFRKRKKSIYKKADELSKLCGIDVCLIVYEADQKKGRA
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa018410mg
Prunus persica
PRUPE_ppa018410mg
N
0.972
Pm025576
Prunus mume
Pm025576
N
0.944
PRUPE_ppa013383mg
Prunus persica
PRUPE_ppa013383mg
N
0.889
Pm025614
Prunus mume
Pm025614
N
0.889
PRUPE_ppa023499mg
Prunus persica
PRUPE_ppa023499mg
N
0.800
PRUPE_ppa026256mg
Prunus persica
PRUPE_ppa026256mg
N
0.800
Pm025575
Prunus mume
Pm025575
N
0.800
Pm025578
Prunus mume
Pm025578
N
0.800
MDP0000185853
Malus domestica
MDP0000185853
N
0.722