1735_Multiple (Saccharomyces paradoxus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 1735_Multiple T259301_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		1.000 1.000
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		1.000 1.000
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.917 0.917
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.917 0.917
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
1735_Multiple MADS box 10 57

Links

Other MADS box family TFs
Other Saccharomyces paradoxus TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZAT7 Arabidopsis thaliana AT3G46090 D 0.000
Traes_5BL_3B50B6963 Triticum aestivum Traes_5BL_3B50B6963 I 0.000
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.000
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.000
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I 0.000
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.000
Si037672m.g Setaria italica Si037672m.g I 0.000
Si037251m.g Setaria italica Si037251m.g I 0.000
Si008395m.g Setaria italica Si008395m.g I 0.000
Si003051m.g Setaria italica Si003051m.g I 0.000
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.000
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.000
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.000
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.000
PGSC0003DMG400008327 Solanum tuberosum PGSC0003DMG400008327 I 0.000
OS05G0460900 Oryza sativa OS05G0460900 I 0.000
OS03G0820400 Oryza sativa OS03G0820400 I 0.000
OS01G0839100 Oryza sativa OS01G0839100 I 0.000
ORUFI05G20520 Oryza rufipogon ORUFI05G20520 I 0.000
ORGLA05G0167500 Oryza glaberrima ORGLA05G0167500 I 0.000
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.000
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.000
OPUNC05G16960 Oryza punctata OPUNC05G16960 I 0.000
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.000
Thhalv10014884m.g Eutrema salsugineum Thhalv10014884m.g I 0.000
Carubv10018142m.g Capsella rubella Carubv10018142m.g I 0.000
ZAT8 Arabidopsis thaliana AT3G46080 I 0.000
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.000
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.000
Pavir.J00893 Panicum virgatum Pavir.J00893 I 0.000
Pavir.Ib04509 Panicum virgatum Pavir.Ib04509 I 0.000
Pavir.Ia00294 Panicum virgatum Pavir.Ia00294 I 0.000
Pavir.Ia00291 Panicum virgatum Pavir.Ia00291 I 0.000
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.000
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.000
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.000
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.000
Traes_5BL_8DB8274DB1 Triticum aestivum Traes_5BL_8DB8274DB1 I 0.000
Cagra.7309s0001 Capsella grandiflora Cagra.7309s0001 I 0.000
Cagra.1317s0034 Capsella grandiflora Cagra.1317s0034 I 0.000
Bostr.26833s0254 Boechera stricta Bostr.26833s0254 I 0.000
TRIUR3_15911 Triticum urartu TRIUR3_15911 I 0.000
TRIUR3_12166 Triticum urartu TRIUR3_12166 I 0.000
Traes_5DL_F269EF70D Triticum aestivum Traes_5DL_F269EF70D I 0.000
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.000
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.000
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I 0.000
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.000
Traes_5BL_B038BE0A3 Triticum aestivum Traes_5BL_B038BE0A3 I 0.000
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.000
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.000
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.000
GRMZM2G002815 Zea mays GRMZM2G002815 I 0.000
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.000
GLYMA15G04570 Glycine max GLYMA15G04570 I 0.000
GLYMA13G40860 Glycine max GLYMA13G40860 I 0.000
GLYMA11G15140 Glycine max GLYMA11G15140 I 0.000
fgenesh2_kg.5__981__AT3G46090.1 Arabidopsis lyrata fgenesh2_kg.5__981__AT3G46090.1 I 0.000
F775_18608 Aegilops tauschii F775_18608 I 0.000
F775_17661 Aegilops tauschii F775_17661 I 0.000
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.000
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.000
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.000
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.000
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.000
Bra020284 Brassica rapa Bra020284 I 0.000
Bra006692 Brassica rapa Bra006692 I 0.000
Bra006691 Brassica rapa Bra006691 I 0.000
Bo9g140820 Brassica oleracea Bo9g140820 I 0.000
Bo3g017740 Brassica oleracea Bo3g017740 I 0.000
Bo2g025350 Brassica oleracea Bo2g025350 I 0.000
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.000
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.000
MLOC_67028 Hordeum vulgare MLOC_67028 I 0.000
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.000
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.000
OMERI05G16850 Oryza meridionalis OMERI05G16850 I 0.000
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.000
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.000
OGLUM05G20400 Oryza glumaepatula OGLUM05G20400 I 0.000
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.000
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.000
OBART05G19310 Oryza barthii OBART05G19310 I 0.000
OBART03G39050 Oryza barthii OBART03G39050 I 0.000
OB03G46010 Oryza brachyantha OB03G46010 I 0.000
MTR_2g096540 Medicago truncatula MTR_2g096540 I 0.000
ONIVA05G20190 Oryza nivara ONIVA05G20190 I 0.000
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.000
MLOC_14920 Hordeum vulgare MLOC_14920 I 0.000
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.000
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.000
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.000
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.000
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.000
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.000
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.000
TRIUR3_01057 Triticum urartu TRIUR3_01057 N 0.000
Traes_5BL_56E52A2FC Triticum aestivum Traes_5BL_56E52A2FC N 0.000