CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g106130
(
Brassica oleracea
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
Bo8g106130
T259941_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g106130.1
MBD
4
77
TDEMVSIELPAPSSWKKLFYPEFAGSPRKTNIVFVAPTGERISSRKQLEKYLKAHPGSPVISEFDWTNGESPRR
Links
Other
MBD
family TFs
Other
Brassica oleracea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD10
Arabidopsis thaliana
AT1G15340
N
0.838
MBD11
Arabidopsis thaliana
AT3G15790
N
0.712
Bo8g066360
Brassica oleracea
Bo8g066360
N
0.838
Bra016665
Brassica rapa
Bra016665
N
0.838
Bra026773
Brassica rapa
Bra026773
N
0.931
MBD10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001305
N
0.824
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.703
MBD11
Arabidopsis lyrata
scaffold_301848.1
N
0.740
Ca_19192
Cicer arietinum
Ca_19192
N
0.703
Bostr.7128s0147
Boechera stricta
Bostr.7128s0147
N
0.784
Cagra.2238s0088
Capsella grandiflora
Cagra.2238s0088
N
0.784
Carubv10009517m.g
Capsella rubella
Carubv10009517m.g
N
0.784
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.738
Thhalv10007967m.g
Eutrema salsugineum
Thhalv10007967m.g
N
0.811