CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0014s13360
(
Populus trichocarpa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
POPTR_0014s13360
T263444_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0014s13360.1
mTERF
80
168
RKQRSSSSLYSRPSLLEMKNEKIANRAKVYEFLRGIGIVPDELDGLELPVTTEVMRERVDFLHKLGLTIEDINNYPLVLGCSVKKNMIP
POPTR_0014s13360.1
mTERF
170
478
LDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLDPVVKYLQGMDIKPNDIPRVLERYPEILGFKLEGTMSTSVAYLVGIGLARREVGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEEQVKPNVGSLLEFNVRKSSLPSVVAQYPEIIGIELKEKLLGQQCLLHSVIDLGPEDFGRVVEKMPQVVSLSRLPIVKHVDFLKDCGFSLQQVRAMVVGCPQLLALNLDIMKHSFDYFQVEMERPLDDLVTFPAFFTYGLESTIKPRHKRVAKKGMKCSLSWILNCSDEKFE
Links
Other
mTERF
family TFs
Other
Populus trichocarpa
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
IDEF1
Oryza sativa
OS08G0101000
D
ONIVA08G00050
Oryza nivara
ONIVA08G00050
I
Pavir.Fb00027
Panicum virgatum
Pavir.Fb00027
I
Pavir.Fa02368
Panicum virgatum
Pavir.Fa02368
I
TRIUR3_27457
Triticum urartu
TRIUR3_27457
I
Traes_7BL_6183FA9D4
Triticum aestivum
Traes_7BL_6183FA9D4
I
Traes_7AL_C0DB55E98
Triticum aestivum
Traes_7AL_C0DB55E98
I
Si015586m.g
Setaria italica
Si015586m.g
I
Sb07g000220
Sorghum bicolor
Sb07g000220
I
ORUFI08G00070
Oryza rufipogon
ORUFI08G00070
I
BGIOSGA027821
Oryza indica
BGIOSGA027821
I
OLONG_014444
Oryza longistaminata
OLONG_014444
I
OGLUM08G00080
Oryza glumaepatula
OGLUM08G00080
I
OBART08G00060
Oryza barthii
OBART08G00060
I
OB08G10110
Oryza brachyantha
OB08G10110
I
LPERR08G00120
Leersia perrieri
LPERR08G00120
I
GRMZM2G125596
Zea mays
GRMZM2G125596
I
F775_28679
Aegilops tauschii
F775_28679
I
BRADI3G12910
Brachypodium distachyon
BRADI3G12910
I
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N