CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava6394.valid.m1
(
Manihot esculenta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
cassava6394.valid.m1
T264369_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava6394.valid.m1
mTERF
32
341
LWFFRDRGFDDKSIHEMFRKCKRLEGIQKERASENWSYLKSIGIQERRLPYVISKCPKILTLDLNEKLVPMVECLATLANKRAEVASAITKFPHILSHSVEEKLCPLLAFFQALGVPEKQLGKIIFLNPRLISYSINSKLTEIVDFLAGLGLNKDGMIGKVLVKHPFIMGYSVDKRLRPTLEFMKSVGLTDMNLQTVVMNFPEVLCRDVNKILRPNLTYLRRCGFEDRQIAAIVTGYPPILIKSIKNSLEPRMKFLVEVMGRQIDEAADYPSFFQHSLKKIVESRYKLLKQKNVECSLSEMLDCNQKKFL
Links
Other
mTERF
family TFs
Other
Manihot esculenta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400023133
Solanum tuberosum
PGSC0003DMG400023133
N
0.722
pde191
Populus trichocarpa
POPTR_0009s17140
N
0.755
PRUPE_ppa008508mg
Prunus persica
PRUPE_ppa008508mg
N
0.752
Solyc11g044360.1
Solanum lycopersicum
Solyc11g044360.1
N
0.719
Pm020708
Prunus mume
Pm020708
N
0.752
mgf010879m
Mimulus guttatus
mgf010879m
N
0.719
Bostr.25542s0005
Boechera stricta
Bostr.25542s0005
N
0.703
Cagra.1383s0005
Capsella grandiflora
Cagra.1383s0005
N
0.703
gene17122-v1.0-hybrid
Fragaria vesca
gene17122-v1.0-hybrid
N
0.784
MDP0000296585
Malus domestica
MDP0000296585
N
0.752
SapurV1A.0216s0390
Salix purpurea
SapurV1A.0216s0390
N
0.781
Thhalv10004546m.g
Eutrema salsugineum
Thhalv10004546m.g
N
0.719
PK01272.1
Cannabis sativa
PK01272.1
N
0.729