CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.30275s0443
(
Boechera stricta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Bostr.30275s0443
T264596_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.30275s0443.1.p
mTERF
165
260
LPQKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYEPGLLASKLRDYENLDLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKRLQ
Bostr.30275s0443.1.p
mTERF
285
515
IEFLDKVGCKDEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEINRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETHFITKILLSHMELIGSCSLQAPRTACLNLNVRQDELCQILKKEPLRLFSFVSTTKKRKSKPLSEDSRKYSEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIKHAPMILNLSKDVIEKKIHSLTKLL
Bostr.30275s0443.1.p
mTERF
429
570
LSEDSRKYSEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNVVTEIIKHAPMILNLSKDVIEKKIHSLTKLLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Boechera stricta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT4G19650
Arabidopsis thaliana
AT4G19650
N
0.896
scaffold_702442.1
Arabidopsis lyrata
scaffold_702442.1
N
0.908
Cagra.3262s0017
Capsella grandiflora
Cagra.3262s0017
N
0.894
Carubv10004425m.g
Capsella rubella
Carubv10004425m.g
N
0.899
Thhalv10024740m.g
Eutrema salsugineum
Thhalv10024740m.g
N
0.839