CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT4G19650
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT4G19650
T262062_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G19650.1
mTERF
130
240
FEPFFESLGLCPYEFETFLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLK
AT4G19650.1
mTERF
268
499
IEFLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLG
AT4G19650.1
mTERF
412
553
LSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFV
AT4G19650.2
mTERF
150
257
FFESLGLCPYEFETFLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLK
AT4G19650.2
mTERF
285
516
IEFLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLG
AT4G19650.2
mTERF
429
570
LSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_702442.1
Arabidopsis lyrata
scaffold_702442.1
N
0.959
Carubv10004425m.g
Capsella rubella
Carubv10004425m.g
N
0.944
Cagra.3262s0017
Capsella grandiflora
Cagra.3262s0017
N
0.940
Bostr.30275s0443
Boechera stricta
Bostr.30275s0443
N
0.896
Thhalv10024740m.g
Eutrema salsugineum
Thhalv10024740m.g
N
0.859
Bra013414
Brassica rapa
Bra013414
N
0.750
Bo1g021780
Brassica oleracea
Bo1g021780
N
0.729