CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g021780
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo1g021780
T262118_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g021780.1
mTERF
125
254
RDVSRALSKYLRYNPINEFEPFFESLDLSPSEFEQFLPQRLMFLSDDDVMFENFHALCNYGVPRGKIGRVYKEAREVFRYESGVLVSKLRAYEDLGLRKGTVIKVVTSCPLLLVGGVDGEFASVVDKLKR
Bo1g021780.1
mTERF
281
423
MEFLERMGCKEEKLSSLLRTYPALVIEGSGKKFYVLFGGLFKVGLQVNEIYSLFIDNPEMLSDKCVKNIRKTVDFLIGIRMETHFIRKILLSHTERIGSCSLQAPRTVCVSLNVSQEELCQMLKNEPLRLFSFVTTTKKRKSK
Bo1g021780.1
mTERF
412
566
SFVTTTKKRKSKLLSEDARKHAEKTAFLMRLGYLENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNHNTVAEIIRHAPIVLNLSKDVIEKKIHSLTELLGYPIESLVSFPAYLCYDMQRIHQRFSMYLWLRERDAARPMLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra013414
Brassica rapa
Bra013414
N
0.934
Carubv10004425m.g
Capsella rubella
Carubv10004425m.g
N
0.754
scaffold_702442.1
Arabidopsis lyrata
scaffold_702442.1
N
0.737
Cagra.3262s0017
Capsella grandiflora
Cagra.3262s0017
N
0.735
AT4G19650
Arabidopsis thaliana
AT4G19650
N
0.729
Thhalv10024740m.g
Eutrema salsugineum
Thhalv10024740m.g
N
0.702