MYB124 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G14350 T266327_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB124
M01267_2.00		 Arabidopsis thaliana
NNVCGCKCBN
NVGMGCGBNN		 PBM
Lambert et al.(2019)
pTH11556		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB88
M07042_2.00 		Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN		 Dap-seq
OMalley et al.(2016)
MYB88_col_a 		0.824 0.912
MYB88
M07043_2.00 		Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN		 Dap-seq
OMalley et al.(2016)
MYB88_colamp_a 		0.824 0.912
MYB88
M11038_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB88_01 		0.824 0.912
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01267_2.00 Myb 26 71
M01267_2.00 Myb 77 121

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G14350.1 Myb 26 71
AT1G14350.1 Myb 77 121
AT1G14350.2 Myb 26 71
AT1G14350.2 Myb 77 121
AT1G14350.3 Myb 34 78
AT1G14350.4 Myb 34 78

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB88 Arabidopsis thaliana AT2G02820 D 0.824
Carubv10017119m.g Capsella rubella Carubv10017119m.g I 0.773
Traes_2BS_F1B450FA4 Triticum aestivum Traes_2BS_F1B450FA4 I 0.671
Carubv10011707m.g Capsella rubella Carubv10011707m.g I 0.893
Cagra.3501s0066 Capsella grandiflora Cagra.3501s0066 I 0.893
Cagra.0534s0022 Capsella grandiflora Cagra.0534s0022 I 0.773
Bostr.13671s0016 Boechera stricta Bostr.13671s0016 I 0.893
Bostr.0556s0099 Boechera stricta Bostr.0556s0099 I 0.794
Aquca_002_00543 Aquilegia coerulea Aquca_002_00543 I 0.753
mgf009409m Mimulus guttatus mgf009409m I 0.814
Cucsa.285270 Cucumis sativus Cucsa.285270 I 0.804
cassava39089.m1 Manihot esculenta cassava39089.m1 I 0.847
cassava35260.valid.m1 Manihot esculenta cassava35260.valid.m1 I 0.847
29736.m002013 Ricinus communis 29736.m002013 I 0.849
Pm006532 Prunus mume Pm006532 I 0.809
Cla010333 Citrullus lanatus Cla010333 I 0.804
Ca_18779 Cicer arietinum Ca_18779 I 0.817
VIT_01s0026g01910 Vitis vinifera VIT_01s0026g01910 I 0.813
Traes_2DS_9430AAD52 Triticum aestivum Traes_2DS_9430AAD52 I 0.671
PDK_20s1473891g001 Phoenix dactylifera PDK_20s1473891g001 I 0.730
MDP0000210970 Malus domestica MDP0000210970 I 0.801
AMTR_s00010p00252990 Amborella trichopoda AMTR_s00010p00252990 I 0.682
PK05123.1 Cannabis sativa PK05123.1 I 0.808
Thhalv10007659m.g Eutrema salsugineum Thhalv10007659m.g I 0.892
Thhalv10004109m.g Eutrema salsugineum Thhalv10004109m.g I 0.841
SapurV1A.0200s0020 Salix purpurea SapurV1A.0200s0020 I 0.808
SapurV1A.0062s0030 Salix purpurea SapurV1A.0062s0030 I 0.847
Pavir.J36475 Panicum virgatum Pavir.J36475 I 0.699
Pavir.Bb03405 Panicum virgatum Pavir.Bb03405 I 0.679
orange1.1g044977m.g Citrus sinensis orange1.1g044977m.g I 0.810
Ciclev10031405m.g Citrus clementina Ciclev10031405m.g I 0.810
MDP0000165523 Malus domestica MDP0000165523 I 0.847
Lus10030494.g Linum usitatissimum Lus10030494.g I 0.785
Lus10012847.g Linum usitatissimum Lus10012847.g I 0.785
Gorai.013G083300 Gossypium raimondii Gorai.013G083300 I 0.873
Gorai.005G139500 Gossypium raimondii Gorai.005G139500 I 0.839
evm.TU.supercontig_183.27 Carica papaya evm.TU.supercontig_183.27 I 0.839
Eucgr.G02522 Eucalyptus grandis Eucgr.G02522 I 0.757
Eucgr.B03417 Eucalyptus grandis Eucgr.B03417 I 0.812
GLYMA01G05190 Glycine max GLYMA01G05190 I 0.808
MTR_8g468380 Medicago truncatula MTR_8g468380 I 0.798
MTR_5g038910 Medicago truncatula MTR_5g038910 I 0.817
LPERR07G19800 Leersia perrieri LPERR07G19800 I 0.674
GSMUA_Achr10G18880_001 Musa acuminata GSMUA_Achr10G18880_001 I 0.716
GRMZM2G064630 Zea mays GRMZM2G064630 I 0.731
GLYMA18G16040 Glycine max GLYMA18G16040 I 0.769
GLYMA08G40950 Glycine max GLYMA08G40950 I 0.830
GLYMA02G02310 Glycine max GLYMA02G02310 I 0.817
OB07G28520 Oryza brachyantha OB07G28520 I 0.717
MYB88 Arabidopsis lyrata fgenesh2_kg.5__181__AT2G02820.2 I 0.824
FLP Arabidopsis lyrata fgenesh2_kg.1__1561__AT1G14350.1 I 0.854
Bra024804 Brassica rapa Bra024804 I 0.855
Bra019658 Brassica rapa Bra019658 I 0.892
Bo7g080730 Brassica oleracea Bo7g080730 I 0.844
Bo5g019500 Brassica oleracea Bo5g019500 I 0.883
Bo2g136560 Brassica oleracea Bo2g136560 I 0.834
BGIOSGA026188 Oryza indica BGIOSGA026188 I 0.722
PGSC0003DMG400025612 Solanum tuberosum PGSC0003DMG400025612 I 0.787
TCM_011776 Theobroma cacao TCM_011776 I 0.877
Solyc05g007160.2 Solanum lycopersicum Solyc05g007160.2 I 0.787
Solyc04g005710.1 Solanum lycopersicum Solyc04g005710.1 I 0.709
Si029124m.g Setaria italica Si029124m.g I 0.709
Sb02g040050 Sorghum bicolor Sb02g040050 I 0.731
PRUPE_ppa017536mg Prunus persica PRUPE_ppa017536mg I 0.809
POPTR_0010s10310 Populus trichocarpa POPTR_0010s10310 I 0.847
POPTR_0008s14790 Populus trichocarpa POPTR_0008s14790 I 0.808
PGSC0003DMG400026758 Solanum tuberosum PGSC0003DMG400026758 I 0.692
Traes_2AS_1161E1D2E Triticum aestivum Traes_2AS_1161E1D2E I 0.671
PGSC0003DMG400002828 Solanum tuberosum PGSC0003DMG400002828 I 0.692
OS07G0627300 Oryza sativa OS07G0627300 I 0.722
ORUFI07G24080 Oryza rufipogon ORUFI07G24080 I 0.722
ORGLA07G0179200 Oryza glaberrima ORGLA07G0179200 I 0.722
OPUNC07G21540 Oryza punctata OPUNC07G21540 I 0.722
OGLUM07G22980 Oryza glumaepatula OGLUM07G22980 I 0.722
OBART07G22930 Oryza barthii OBART07G22930 I 0.722
MLOC_9840 Hordeum vulgare MLOC_9840 N 0.680