BGIOSGA009746 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA009746 T266795_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.837 0.925
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.837 0.925
MYB80
M07142_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHNN
NNDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MS188_col_a 		0.673 0.667
MYB80
M07143_2.00 		Arabidopsis thaliana
YYYACCTAMYTWNNN
NNNWARKTAGGTRRR		 Dap-seq
OMalley et al.(2016)
MS188_colamp_a 		0.673 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA009746-PA Myb 14 62
BGIOSGA009746-PA Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

490 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU03417 Neurospora crassa NCU03417 D
MYCTH_2311613 Myceliophthora thermophila MYCTH_2311613 I
fgenesh1_pm.C_scaffold_2000244 Cryphonectria parasitica fgenesh1_pm.C_scaffold_2000244 I
estExt_Genewise1Plus.C_160104 Neurospora discreta estExt_Genewise1Plus.C_160104 I
VDAG_01994 Verticillium dahliae VDAG_01994 I
UCRPA7_8449 Togninia minima UCRPA7_8449 I
THITE_2123319 Thielavia terrestris THITE_2123319 I
SPBR_05575 Sporothrix brasiliensis SPBR_05575 I
SMAC_08866 Sordaria macrospora SMAC_08866 I
OCS_03653 Ophiocordyceps sinensis OCS_03653 I
NEUTE1DRAFT_123378 Neurospora tetrasperma NEUTE1DRAFT_123378 I
CGGC5_13803 Colletotrichum gloeosporioides CGGC5_13803 I
HMPREF1624_04479 Sporothrix schenckii HMPREF1624_04479 I
GLRG_10304 Colletotrichum graminicola GLRG_10304 I
GGTG_10910 Gaeumannomyces graminis GGTG_10910 I
F503_03916 Ophiostoma piceae uamh F503_03916 I
CTHT_0001980 Chaetomium thermophilum CTHT_0001980 I
CSUB01_10846 Colletotrichum sublineola CSUB01_10846 I
Cob_11656 Colletotrichum orbiculare Cob_11656 I
CMQ_3833 Grosmannia clavigera CMQ_3833 I
CHGG_08120 Chaetomium globosum CHGG_08120 I
CH063_01773 Colletotrichum higginsianum CH063_01773 I
SAPIO_CDS0891 Scedosporium apiospermum SAPIO_CDS0891 N