fgenesh_scip_prom.46568.5993 (Phytophthora kernoviae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh_scip_prom.46568.5993 T270937_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra72796
M02331_2.00 		Phytophthora ramorum
NHAYCYNNN
NNNRGRTDN		 PBM
Weirauch et al.(2014)
pTH7803 		0.875 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.5993 Myb 27 73

Links

Other Myb/SANT family TFs
Other Phytophthora kernoviae TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra72796 Phytophthora ramorum Phyra72796 D 0.875
F443_20633 Phytophthora parasitica F443_20633 I 0.666
fgenesh1_kg.C_scaffold_1000461 Phytophthora capsici fgenesh1_kg.C_scaffold_1000461 I 0.694
e_gw1.4.390.1 Phytophthora capsici e_gw1.4.390.1 I 0.666
PYU1_G004134 Pythium ultimum PYU1_G004134 I 0.853
PITG_14364 Phytophthora infestans PITG_14364 I 0.666
PITG_00513 Phytophthora infestans PITG_00513 I 0.909
Physo142552 Phytophthora sojae Physo142552 I 0.909
Physo132994 Phytophthora sojae Physo132994 I 0.666
maker-pve_contig_695-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_695-fgenesh-gene-0.3 I 0.693
maker-pve_contig_182-snap-gene-0.15 Pythium vexans maker-pve_contig_182-snap-gene-0.15 I 0.875
maker-piw_contig_2979-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_2979-fgenesh-gene-0.0 I 0.714
maker-pir_contig_1401-snap-gene-0.1 Pythium irregulare maker-pir_contig_1401-snap-gene-0.1 I 0.853
maker-pir_contig_1153-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1153-fgenesh-gene-0.2 I 0.735
maker-par_contig_5774-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_5774-fgenesh-gene-0.0 I 0.813
maker-pag1_scaffold_4-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_4-fgenesh-gene-0.4 I 0.773
HpaG811872 Hyaloperonospora arabidopsidis HpaG811872 I 0.791
HpaG801016 Hyaloperonospora arabidopsidis HpaG801016 I 0.791
fgenesh_scip_prom.46568.10732 Phytophthora kernoviae fgenesh_scip_prom.46568.10732 I 0.666
fgenesh_scip_prom.28083.3668 Phytophthora lateralis fgenesh_scip_prom.28083.3668 I 0.835
F443_04247 Phytophthora parasitica F443_04247 I 0.909
maker-piw_contig_357-snap-gene-0.7 Pythium iwayamai maker-piw_contig_357-snap-gene-0.7 N 0.689