ONIVA02G05950 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA02G05950 T276218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.857 0.957
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.857 0.957
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.857 0.957
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.857 0.957
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.815 0.957
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.815 0.957
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.815 0.957
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.813 0.830
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.807 0.809
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.807 0.809
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.807 0.809
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.790 0.830
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.790 0.830
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.790 0.830
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.790 0.830
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.738 0.745
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.738 0.745
Q5IWM2_WHEAT
M11059_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB80_01 		0.718 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA02G05950.1 Myb 46 97

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

798 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP42 Arabidopsis thaliana AT3G30530 D
OS02G0266800 Oryza sativa OS02G0266800 D
OS02G0728001 Oryza sativa OS02G0728001 D
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA008968 Oryza indica BGIOSGA008968 I
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo3g010620 Brassica oleracea Bo3g010620 I
Bo3g010750 Brassica oleracea Bo3g010750 I
Bo9g163740 Brassica oleracea Bo9g163740 I
Bra006324 Brassica rapa Bra006324 I
Bra008670 Brassica rapa Bra008670 I
Bra023540 Brassica rapa Bra023540 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
GLYMA01G09510 Glycine max GLYMA01G09510 I
GLYMA01G40370 Glycine max GLYMA01G40370 I
GLYMA02G13960 Glycine max GLYMA02G13960 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA04G01210 Glycine max GLYMA04G01210 I
GLYMA06G01240 Glycine max GLYMA06G01240 I
GLYMA11G04920 Glycine max GLYMA11G04920 I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA17G17100 Glycine max GLYMA17G17100 I
GLYMA19G05050 Glycine max GLYMA19G05050 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GRMZM2G020799 Zea mays GRMZM2G020799 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
MTR_4g097440 Medicago truncatula MTR_4g097440 I
MTR_5g015090 Medicago truncatula MTR_5g015090 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
MTR_8g015250 Medicago truncatula MTR_8g015250 I
OB06G31430 Oryza brachyantha OB06G31430 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OBART02G31030 Oryza barthii OBART02G31030 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I
OLONG_004835 Oryza longistaminata OLONG_004835 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI02G29910 Oryza meridionalis OMERI02G29910 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA02G34180 Oryza nivara ONIVA02G34180 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC02G28720 Oryza punctata OPUNC02G28720 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I
OS02G0175100 Oryza sativa OS02G0175100 I
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I
Sb04g005020 Sorghum bicolor Sb04g005020 I
Si017778m.g Setaria italica Si017778m.g I
Si019897m.g Setaria italica Si019897m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
TCM_000835 Theobroma cacao TCM_000835 I
TCM_026349 Theobroma cacao TCM_026349 I
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
Ca_09362 Cicer arietinum Ca_09362 I
Ca_17416 Cicer arietinum Ca_17416 I
Cla005975 Citrullus lanatus Cla005975 I
Cla008074 Citrullus lanatus Cla008074 I
Cla015037 Citrullus lanatus Cla015037 I
Cla016748 Citrullus lanatus Cla016748 I
Cla016841 Citrullus lanatus Cla016841 I
Cla020641 Citrullus lanatus Cla020641 I
Pm002353 Prunus mume Pm002353 I
Pm015434 Prunus mume Pm015434 I
29598.m000468 Ricinus communis 29598.m000468 I
30131.m007078 Ricinus communis 30131.m007078 I
30138.m003866 Ricinus communis 30138.m003866 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava32522.m1 Manihot esculenta cassava32522.m1 I
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I
cassava40461.m1 Manihot esculenta cassava40461.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
cassava46237.m1 Manihot esculenta cassava46237.m1 I
cassava9577.m1 Manihot esculenta cassava9577.m1 I
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Cucsa.174700 Cucumis sativus Cucsa.174700 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
mgf003466m Mimulus guttatus mgf003466m I
mgf007535m Mimulus guttatus mgf007535m I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
mgf013074m Mimulus guttatus mgf013074m I
mgf017392m Mimulus guttatus mgf017392m I
mgf018581m Mimulus guttatus mgf018581m I
mgf021986m Mimulus guttatus mgf021986m I
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
Carubv10002068m.g Capsella rubella Carubv10002068m.g I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I
Lus10011722.g Linum usitatissimum Lus10011722.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000738631 Malus domestica MDP0000738631 I
MDP0000863909 Malus domestica MDP0000863909 I
MDP0000891108 Malus domestica MDP0000891108 I
MDP0000891899 Malus domestica MDP0000891899 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I
PK07533.1 Cannabis sativa PK07533.1 I
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N
Ca_15971 Cicer arietinum Ca_15971 N
28976.m000155 Ricinus communis 28976.m000155 N
mgf004063m Mimulus guttatus mgf004063m N
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N
MDP0000261154 Malus domestica MDP0000261154 N
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N
PK01815.1 Cannabis sativa PK01815.1 N