POPTR_0019s14120 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0019s14120 T278543_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.672 0.677
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.672 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s14120.1 Myb 14 61
POPTR_0019s14120.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_11490 Wuchereria bancrofti WUBG_11490 N
Bm9357 Brugia malayi Bm9357 N
LOAG_16689 Loa loa LOAG_16689 N
WBGene00244696 Onchocerca volvulus WBGene00244696 N
ASIM_0001797201 Anisakis simplex ASIM_0001797201 N
ASU_07850 Ascaris suum ASU_07850 N
ASU_10156 Ascaris suum ASU_10156 N
DME_0000394001 Dracunculus medinensis DME_0000394001 N
EVEC_0000016901 Enterobius vermicularis EVEC_0000016901 N
GPUH_0001412301 Gongylonema pulchrum GPUH_0001412301 N
nDi.2.2.2.g10211 Dirofilaria immitis nDi.2.2.2.g10211 N
nLs.2.1.2.g09588 Litomosoides sigmodontis nLs.2.1.2.g09588 N
nOo.2.0.1.g08345 Onchocerca ochengi nOo.2.0.1.g08345 N
OFLC_0001521701 Onchocerca flexuosa OFLC_0001521701 N
TCLT_0000203401 Thelazia callipaeda TCLT_0000203401 N