CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Z517_05287
(
Fonsecaea pedrosoi
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Z517_05287
T282198_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.715
0.815
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.715
0.815
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.707
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW82260
Myb
6
52
GGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWTEWL
KIW82260
Myb
58
102
KIEWSKEEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLL
Links
Other
Myb/SANT
family TFs
Other
Fonsecaea pedrosoi
TFs
543 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000246901
Elaeophora elaphi
EEL_0000246901
N
TCLT_0000679601
Thelazia callipaeda
TCLT_0000679601
N
nOo.2.0.1.g06019
Onchocerca ochengi
nOo.2.0.1.g06019
N
nLs.2.1.2.g08165
Litomosoides sigmodontis
nLs.2.1.2.g08165
N
nDi.2.2.2.g00142
Dirofilaria immitis
nDi.2.2.2.g00142
N
nAv.1.0.1.g09085
Acanthocheilonema viteae
nAv.1.0.1.g09085
N
L898_g16670
Steinernema monticolum
L898_g16670
N
L893_g18581
Steinernema glaseri
L893_g18581
N
L892_g20284
Steinernema scapterisci
L892_g20284
N
L889_g22347
Steinernema feltiae
L889_g22347
N
L596_g10637
Steinernema carpocapsae
L596_g10637
N
HCOI00039700
Haemonchus contortus
HCOI00039700
N
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
EVEC_0000342301
Enterobius vermicularis
EVEC_0000342301
N
Bm4541
Brugia malayi
Bm4541
N
DME_0000389301
Dracunculus medinensis
DME_0000389301
N
ASU_04966
Ascaris suum
ASU_04966
N
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
ALUE_0000590301
Ascaris lumbricoides
ALUE_0000590301
N
WBGene00245587
Onchocerca volvulus
WBGene00245587
N
gei-13
Caenorhabditis elegans
WBGene00001570
N
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
LOAG_17673
Loa loa
LOAG_17673
N
CRE25566
Caenorhabditis remanei
CRE25566
N
CJA06713
Caenorhabditis japonica
CJA06713
N
CBN24253
Caenorhabditis brenneri
CBN24253
N
CBG10038
Caenorhabditis briggsae
CBG10038
N