Ca_19427 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_19427 T283087_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.673 0.785
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.673 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19427 Myb 166 212
Ca_19427 Myb 218 263

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB98 Arabidopsis thaliana AT4G18770 D 0.673
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.673
TCM_016909 Theobroma cacao TCM_016909 I 0.701
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.678
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.674
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.728
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.683
30147.m013937 Ricinus communis 30147.m013937 I 0.683
29917.m001977 Ricinus communis 29917.m001977 I 0.661
Pm024743 Prunus mume Pm024743 I 0.683
Pm015681 Prunus mume Pm015681 I 0.698
Cla019490 Citrullus lanatus Cla019490 I 0.677
Ca_17294 Cicer arietinum Ca_17294 I 0.666
Ca_17087 Cicer arietinum Ca_17087 I 0.695
Ca_07482 Cicer arietinum Ca_07482 I 0.689
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.703
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.675
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.675
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.675
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.670
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.663
TCM_012087 Theobroma cacao TCM_012087 I 0.683
MDP0000199939 Malus domestica MDP0000199939 I 0.662
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.685
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.678
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.661
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.674
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.667
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.664
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.697
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.697
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.701
MDP0000215359 Malus domestica MDP0000215359 I 0.725
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.693
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.673
Lus10039966.g Linum usitatissimum Lus10039966.g I 0.662
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.706
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.667
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.745
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.701
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.693
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.673
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.673
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.688
OB06G13860 Oryza brachyantha OB06G13860 I 0.666
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.767
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.699
MTR_4g088015 Medicago truncatula MTR_4g088015 I 0.723
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.722
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.675
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.755
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.674
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.733
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.674
GLYMA06G19280 Glycine max GLYMA06G19280 I 0.706
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.674
F775_22212 Aegilops tauschii F775_22212 I 0.675
Bra020992 Brassica rapa Bra020992 I 0.676
Bra013346 Brassica rapa Bra013346 I 0.673
Bo3g157300 Brassica oleracea Bo3g157300 I 0.676
Bo1g019910 Brassica oleracea Bo1g019910 I 0.673
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.666
Si039046m.g Setaria italica Si039046m.g I 0.679
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.683
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.707
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.671
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.679
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I 0.670
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.674
OS06G0162700 Oryza sativa OS06G0162700 I 0.666
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.666
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.673
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.666
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.666
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.666
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.666
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.666
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.666
OBART06G04170 Oryza barthii OBART06G04170 I 0.666
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.663
AMTR_s00001p00272410 Amborella trichopoda AMTR_s00001p00272410 N 0.664
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.665
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.665
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.692
MTR_7g037130 Medicago truncatula MTR_7g037130 N 0.689
MTR_7g451170 Medicago truncatula MTR_7g451170 N 0.662