Eucgr.C00947 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00947 T286792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.661 0.710
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00947.1 Myb 14 62
Eucgr.C00947.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
B0310.2 Caenorhabditis elegans WBGene00015138 D
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I
L892_g1322 Steinernema scapterisci L892_g1322 I
L893_g22395 Steinernema glaseri L893_g22395 I
L898_g26631 Steinernema monticolum L898_g26631 I
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I
nOo.2.0.1.g11672 Onchocerca ochengi nOo.2.0.1.g11672 I
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I
L889_g30058 Steinernema feltiae L889_g30058 I
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I
TCNE_0001118001 Toxocara canis TCNE_0001118001 I
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I
Bm10487 Brugia malayi Bm10487 I
CBG08158 Caenorhabditis briggsae CBG08158 I
CBN30348 Caenorhabditis brenneri CBN30348 I
CJA07808 Caenorhabditis japonica CJA07808 I
CRE17142 Caenorhabditis remanei CRE17142 I
EFV53318 Trichinella spiralis EFV53318 I
WBGene00240779 Onchocerca volvulus WBGene00240779 I
Minc12888 Meloidogyne incognita Minc12888 I
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I
WUBG_01471 Wuchereria bancrofti WUBG_01471 I
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I
ASU_06106 Ascaris suum ASU_06106 I
BTMF_0001757301 Brugia timori BTMF_0001757301 I
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I
D917_07770 Trichinella nativa D917_07770 I
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I
HCOI00400800 Haemonchus contortus HCOI00400800 I
L596_g12501 Steinernema carpocapsae L596_g12501 I