Gorai.013G118300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G118300 T287817_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.739 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G118300.1 Myb 3 50
Gorai.013G118300.1 Myb 56 101
Gorai.013G118300.2 Myb 3 50
Gorai.013G118300.2 Myb 56 94
Gorai.013G118300.3 Myb 6 27
Gorai.013G118300.3 Myb 33 78

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr2G00400_001 Musa acuminata GSMUA_Achr2G00400_001 N
GSMUA_Achr4G12210_001 Musa acuminata GSMUA_Achr4G12210_001 N
GSMUA_Achr5G10220_001 Musa acuminata GSMUA_Achr5G10220_001 N
GSMUA_Achr5G12850_001 Musa acuminata GSMUA_Achr5G12850_001 N
GSMUA_Achr7G04630_001 Musa acuminata GSMUA_Achr7G04630_001 N
GSMUA_AchrUn_randomG04070_001 Musa acuminata GSMUA_AchrUn_randomG04070_001 N
OPUNC10G15350 Oryza punctata OPUNC10G15350 N