Lus10027695.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10027695.g T288097_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.741 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.741 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10027695 Myb 199 245
Lus10027695 Myb 251 296

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HINFP Homo sapiens ENSG00000172273 D
ENSNLEG00000007387 Nomascus leucogenys ENSNLEG00000007387 I
Myotis_brandtii_HINFP_10033522 Myotis brandtii Myotis_brandtii_HINFP_10033522 I
ENSP00000318085 Macaca fascicularis ENSP00000318085 I
HINFP Tursiops truncatus ENSTTRG00000002809 I
ENSTSYG00000012226 Tarsius syrichta ENSTSYG00000012226 I
ENSSTOG00000014457 Ictidomys tridecemlineatus ENSSTOG00000014457 I
HINFP Sus scrofa ENSSSCG00000015112 I
ENSSHAG00000009681 Sarcophilus harrisii ENSSHAG00000009681 I
HINFP Pteropus vampyrus ENSPVAG00000005598 I
HINFP Pan troglodytes ENSPTRG00000004372 I
ENSPPYG00000003957 Pongo abelii ENSPPYG00000003957 I
HINFP Procavia capensis ENSPCAG00000013133 I
ENSPANG00000005040 Papio anubis ENSPANG00000005040 I
HINFP Otolemur garnettii ENSOGAG00000007304 I
ENSAMEG00000000033 Ailuropoda melanoleuca ENSAMEG00000000033 I
ENSMPUG00000005286 Mustela putorius furo ENSMPUG00000005286 I
HINFP Macaca mulatta ENSMMUG00000014877 I
HINFP Myotis lucifugus ENSMLUG00000000455 I
HINFP Microcebus murinus ENSMICG00000002733 I
ENSMEUG00000015482 Macropus eugenii ENSMEUG00000015482 I
HINFP Loxodonta africana ENSLAFG00000017500 I
HINFP Gorilla gorilla ENSGGOG00000008087 I
HINFP Equus caballus ENSECAG00000024938 I
ENSCSAG00000002522 Chlorocebus sabaeus ENSCSAG00000002522 I
HINFP Cavia porcellus ENSCPOG00000006488 I
HINFP Callithrix jacchus ENSCJAG00000013942 I
HINFP Canis familiaris ENSCAFG00000012224 I