Lus10040780.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10040780.g T288238_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.678 0.915
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.672 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10040780 Myb 31 81

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N
Si002762m.g Setaria italica Si002762m.g N
Sb03g036430 Sorghum bicolor Sb03g036430 N
OS01G0780800 Oryza sativa OS01G0780800 N
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N
ONIVA01G37460 Oryza nivara ONIVA01G37460 N
OMERI01G30050 Oryza meridionalis OMERI01G30050 N
OLONG_014986 Oryza longistaminata OLONG_014986 N
BGIOSGA000702 Oryza indica BGIOSGA000702 N
OBART01G33150 Oryza barthii OBART01G33150 N
OB01G42000 Oryza brachyantha OB01G42000 N
LPERR01G28620 Leersia perrieri LPERR01G28620 N
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N
GRMZM2G082745 Zea mays GRMZM2G082745 N
GRMZM2G004690 Zea mays GRMZM2G004690 N
BRADI2G51790 Brachypodium distachyon BRADI2G51790 N