Pavir.Eb03405 (Panicum virgatum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pavir.Eb03405 T322266_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb03405.1.p SAND 30 120

Links

Other SAND family TFs
Other Panicum virgatum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si002762m.g Setaria italica Si002762m.g N 0.993
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.979
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.979
OB01G42000 Oryza brachyantha OB01G42000 N 0.979
OBART01G33150 Oryza barthii OBART01G33150 N 0.979
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.979
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.979
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.979
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.979
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.979
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.979
OS01G0780800 Oryza sativa OS01G0780800 N 0.979
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.978
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.978
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.962
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.933
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.930
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.913
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.911
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.903
OPUNC01G32160 Oryza punctata OPUNC01G32160 N 0.899
PK16281.1 Cannabis sativa PK16281.1 N 0.889
BRADI2G51790 Brachypodium distachyon BRADI2G51790 N 0.883
29983.m003255 Ricinus communis 29983.m003255 N 0.869
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.856
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.854
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.851
MDP0000089136 Malus domestica MDP0000089136 N 0.850