MDP0000089136 (Malus domestica)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 MDP0000089136 T322260_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000089136 SAND 29 138

Links

Other SAND family TFs
Other Malus domestica TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.981
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.981
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.981
29983.m003255 Ricinus communis 29983.m003255 N 0.973
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.973
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.970
Cla007849 Citrullus lanatus Cla007849 N 0.967
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.967
PK16281.1 Cannabis sativa PK16281.1 N 0.963
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.960
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.958
MDP0000237588 Malus domestica MDP0000237588 N 0.958
MDP0000315130 Malus domestica MDP0000315130 N 0.958
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.956
Pm015354 Prunus mume Pm015354 N 0.956
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.954
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.950
TCM_007971 Theobroma cacao TCM_007971 N 0.942
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.937
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.936
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.931
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.926
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.917
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.916
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.908
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.906
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.905
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.905
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.903
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.903
OB01G42000 Oryza brachyantha OB01G42000 N 0.903
OBART01G33150 Oryza barthii OBART01G33150 N 0.903
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.903
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.903
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.903
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.903
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.903
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.903
OS01G0780800 Oryza sativa OS01G0780800 N 0.903
Ca_19014 Cicer arietinum Ca_19014 N 0.892
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.888
Si002762m.g Setaria italica Si002762m.g N 0.850
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.850
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.843