gene10278-v1.0-hybrid (Fragaria vesca)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 gene10278-v1.0-hybrid T322252_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna10278.1-v1.0-hybrid SAND 23 104

Links

Other SAND family TFs
Other Fragaria vesca TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.975
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.973
MDP0000237588 Malus domestica MDP0000237588 N 0.973
MDP0000315130 Malus domestica MDP0000315130 N 0.973
Pm015354 Prunus mume Pm015354 N 0.972
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.972
TCM_007971 Theobroma cacao TCM_007971 N 0.970
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.969
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.967
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.965
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.963
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.960
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.948
Ca_19014 Cicer arietinum Ca_19014 N 0.938
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.917
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.917
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.914
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.912
MDP0000089136 Malus domestica MDP0000089136 N 0.908
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.907
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.906
29983.m003255 Ricinus communis 29983.m003255 N 0.904
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.903
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N 0.882
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.880
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.871
Cla007849 Citrullus lanatus Cla007849 N 0.859
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.859
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.851
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.848