Lus10018560.g (Linum usitatissimum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Lus10018560.g T322258_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10018560 SAND 45 136

Links

Other SAND family TFs
Other Linum usitatissimum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.994
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.990
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.986
29983.m003255 Ricinus communis 29983.m003255 N 0.985
MDP0000089136 Malus domestica MDP0000089136 N 0.981
Cla007849 Citrullus lanatus Cla007849 N 0.974
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.974
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.965
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.964
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.956
PK16281.1 Cannabis sativa PK16281.1 N 0.956
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.955
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.954
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.949
Pm015354 Prunus mume Pm015354 N 0.949
TCM_007971 Theobroma cacao TCM_007971 N 0.947
MDP0000237588 Malus domestica MDP0000237588 N 0.946
MDP0000315130 Malus domestica MDP0000315130 N 0.946
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.944
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.943
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.943
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.940
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.937
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.933
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.933
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.929
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.921
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.921
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.907
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.907
OB01G42000 Oryza brachyantha OB01G42000 N 0.907
OBART01G33150 Oryza barthii OBART01G33150 N 0.907
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.907
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.907
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.907
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.907
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.907
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.907
OS01G0780800 Oryza sativa OS01G0780800 N 0.907
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.903
Aquca_102_00032 Aquilegia coerulea Aquca_102_00032 N 0.879
Ca_19014 Cicer arietinum Ca_19014 N 0.867
Si002762m.g Setaria italica Si002762m.g N 0.856
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.856
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.852
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.851