cassava18740.valid.m1 (Manihot esculenta)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 cassava18740.valid.m1 T322183_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18740.valid.m1 SAND 26 110

Links

Other SAND family TFs
Other Manihot esculenta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.986
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.986
Bo7g111950 Brassica oleracea Bo7g111950 N 0.979
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.979
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.977
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.973
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.973
Bo1g051270 Brassica oleracea Bo1g051270 N 0.967
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.964
Bra026276 Brassica rapa Bra026276 N 0.962
TCM_007971 Theobroma cacao TCM_007971 N 0.962
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.959
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.957
Pm015354 Prunus mume Pm015354 N 0.957
MDP0000237588 Malus domestica MDP0000237588 N 0.955
MDP0000315130 Malus domestica MDP0000315130 N 0.955
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.953
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.949
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N 0.948
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.945
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.937
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.936
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.924
MTR_2g090080 Medicago truncatula MTR_2g090080 N 0.919
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.919
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.912
Ca_19014 Cicer arietinum Ca_19014 N 0.907
Bra024219 Brassica rapa Bra024219 N 0.895
ULT1 Arabidopsis thaliana AT4G28190 N 0.893
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N 0.887
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N 0.880
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.851
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.845