Bo1g051270 (Brassica oleracea)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 Bo1g051270 T321571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g051270.1 SAND 34 122

Links

Other SAND family TFs
Other Brassica oleracea TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra026276 Brassica rapa Bra026276 N 0.993
Bo7g111950 Brassica oleracea Bo7g111950 N 0.990
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.989
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.987
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.986
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.985
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.968
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.967
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.967
Bra024219 Brassica rapa Bra024219 N 0.964
ULT1 Arabidopsis thaliana AT4G28190 N 0.961
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.941
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.925
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.925
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N 0.924
Pm015354 Prunus mume Pm015354 N 0.922
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.920
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N 0.919
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.918
MDP0000237588 Malus domestica MDP0000237588 N 0.918
MDP0000315130 Malus domestica MDP0000315130 N 0.918
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.915
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.907
MTR_2g090080 Medicago truncatula MTR_2g090080 N 0.898
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.897
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.889
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.888
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N 0.885
TCM_007971 Theobroma cacao TCM_007971 N 0.872
Ca_19014 Cicer arietinum Ca_19014 N 0.871