POPTR_0013s14170 (Populus trichocarpa)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 POPTR_0013s14170 T322067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s14170.1 SAND 29 117

Links

Other SAND family TFs
Other Populus trichocarpa TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.992
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.991
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.987
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.984
Pm015354 Prunus mume Pm015354 N 0.979
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.978
MDP0000237588 Malus domestica MDP0000237588 N 0.978
MDP0000315130 Malus domestica MDP0000315130 N 0.978
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.977
TCM_007971 Theobroma cacao TCM_007971 N 0.972
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.969
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.960
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.953
Ca_19014 Cicer arietinum Ca_19014 N 0.946
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.943
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.943
Bo1g051270 Brassica oleracea Bo1g051270 N 0.941
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.941
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.939
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.937
29983.m003255 Ricinus communis 29983.m003255 N 0.932
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.932
Bra026276 Brassica rapa Bra026276 N 0.931
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.928
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.919
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.916
Bo7g111950 Brassica oleracea Bo7g111950 N 0.912
MDP0000089136 Malus domestica MDP0000089136 N 0.905
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.891
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N 0.886
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.881
Cla007849 Citrullus lanatus Cla007849 N 0.880
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.880
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.877
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.873
PK16281.1 Cannabis sativa PK16281.1 N 0.863
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.860