Bra026276 (Brassica rapa)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 Bra026276 T321576_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra026276.1-P SAND 37 125

Links

Other SAND family TFs
Other Brassica rapa TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g051270 Brassica oleracea Bo1g051270 N 0.993
Bo7g111950 Brassica oleracea Bo7g111950 N 0.988
Carubv10005638m.g Capsella rubella Carubv10005638m.g N 0.987
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N 0.985
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N 0.984
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N 0.982
GLYMA12G11800 Glycine max GLYMA12G11800 N 0.963
GLYMA06G45180 Glycine max GLYMA06G45180 N 0.962
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.962
Bra024219 Brassica rapa Bra024219 N 0.958
ULT1 Arabidopsis thaliana AT4G28190 N 0.954
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.931
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.912
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.912
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N 0.911
Pm015354 Prunus mume Pm015354 N 0.909
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.907
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N 0.906
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.905
MDP0000237588 Malus domestica MDP0000237588 N 0.905
MDP0000315130 Malus domestica MDP0000315130 N 0.905
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.901
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.892
MTR_2g090080 Medicago truncatula MTR_2g090080 N 0.882
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.880
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.872
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.871
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N 0.867
TCM_007971 Theobroma cacao TCM_007971 N 0.852
Ca_19014 Cicer arietinum Ca_19014 N 0.851