orange1.1g022144m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g022144m.g T288839_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.785 0.892
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.781 0.882
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.781 0.882
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.781 0.882
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.765 0.871
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.765 0.871
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.765 0.871
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.739 0.849
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.739 0.849
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.739 0.849
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.739 0.849
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.739 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.704 0.785
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.666 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022144m Myb 12 58
orange1.1g022144m Myb 64 109

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

320 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLI2 Homo sapiens ENSG00000074047 D
GLI3 Homo sapiens ENSG00000106571 D
Gli2 Mus musculus ENSMUSG00000048402 D
GLI2 Anolis carolinensis ENSACAG00000004133 I
GLI1 Anolis carolinensis ENSACAG00000006541 I
GLI3 Anolis carolinensis ENSACAG00000017547 I
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I
GLI3 Bos taurus ENSBTAG00000010671 I
GLI2 Bos taurus ENSBTAG00000011682 I
GLI3 Canis familiaris ENSCAFG00000003535 I
GLI2 Canis familiaris ENSCAFG00000004821 I
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I
GLI3 Callithrix jacchus ENSCJAG00000007690 I
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I
GLI3 Cavia porcellus ENSCPOG00000013233 I
GLI2 Cavia porcellus ENSCPOG00000015189 I
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I
gli2b Danio rerio ENSDARG00000020884 I
gli2a Danio rerio ENSDARG00000025641 I
gli3 Danio rerio ENSDARG00000052131 I
gli1 Danio rerio ENSDARG00000101244 I
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I
GLI3 Equus caballus ENSECAG00000009281 I
GLI3 Echinops telfairi ENSETEG00000003955 I
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I
GLI3 Felis catus ENSFCAG00000011989 I
GLI2 Felis catus ENSFCAG00000014531 I
gli2b Gasterosteus aculeatus ENSGACG00000001547 I
gli1 Gasterosteus aculeatus ENSGACG00000006458 I
GLI2 Gallus gallus ENSGALG00000011630 I
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I
GLI3 Gorilla gorilla ENSGGOG00000002026 I
GLI2 Gorilla gorilla ENSGGOG00000009653 I
ENSGMOG00000007975 Gadus morhua ENSGMOG00000007975 I
ENSGMOG00000010335 Gadus morhua ENSGMOG00000010335 I
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I
GLI3 Loxodonta africana ENSLAFG00000008944 I
ENSLOCG00000002028 Lepisosteus oculatus ENSLOCG00000002028 I
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I
GLI2 Meleagris gallopavo ENSMGAG00000011872 I
GLI3 Meleagris gallopavo ENSMGAG00000012277 I
GLI3 Microcebus murinus ENSMICG00000010785 I
GLI3 Myotis lucifugus ENSMLUG00000015711 I
GLI2 Macaca mulatta ENSMMUG00000001868 I
GLI3 Macaca mulatta ENSMMUG00000013614 I
GLI2 Monodelphis domestica ENSMODG00000000245 I
GLI3 Monodelphis domestica ENSMODG00000002714 I
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I
GLI3 Otolemur garnettii ENSOGAG00000012651 I
GLI2 Otolemur garnettii ENSOGAG00000032438 I
ENSONIG00000003608 Oreochromis niloticus ENSONIG00000003608 I
ENSONIG00000004472 Oreochromis niloticus ENSONIG00000004472 I
ENSONIG00000005084 Oreochromis niloticus ENSONIG00000005084 I
GLI3 Ochotona princeps ENSOPRG00000011225 I
gli1 Oryzias latipes ENSORLG00000005455 I
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I
GLI2 Procavia capensis ENSPCAG00000001704 I
GLI3 Procavia capensis ENSPCAG00000015092 I
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I
ENSPFOG00000006269 Poecilia formosa ENSPFOG00000006269 I
ENSPFOG00000014778 Poecilia formosa ENSPFOG00000014778 I
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I
GLI2 Pan troglodytes ENSPTRG00000012413 I
GLI3 Pan troglodytes ENSPTRG00000019117 I
GLI3 Pteropus vampyrus ENSPVAG00000015920 I
Gli2 Rattus norvegicus ENSRNOG00000007261 I
Gli3 Rattus norvegicus ENSRNOG00000014395 I
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I
GLI2 Sus scrofa ENSSSCG00000015733 I
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I
ENSSTOG00000020844 Ictidomys tridecemlineatus ENSSTOG00000020844 I
GLI3 Tupaia belangeri ENSTBEG00000006673 I
GLI2 Taeniopygia guttata ENSTGUG00000004599 I
gli1 Tetraodon nigroviridis ENSTNIG00000007058 I
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I
gli2b Takifugu rubripes ENSTRUG00000001954 I
gli2b Takifugu rubripes ENSTRUG00000010444 I
gli1 Takifugu rubripes ENSTRUG00000014998 I
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I
GLI3 Tursiops truncatus ENSTTRG00000003628 I
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I
ENSXMAG00000017965 Xiphophorus maculatus ENSXMAG00000017965 I
Aan_R003640 Calypte anna Aan_R003640 I
Aan_R014715 Calypte anna Aan_R014715 I
Afo_R006826 Aptenodytes forsteri Afo_R006826 I
Afo_R007816 Aptenodytes forsteri Afo_R007816 I
Brh_R008256 Buceros rhinoceros Brh_R008256 I
Brh_R010932 Buceros rhinoceros Brh_R010932 I
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I
ENSP00000379258 Macaca fascicularis ENSP00000379258 I
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I
Gfo_R001212 Geospiza fortis Gfo_R001212 I
Gfo_R007869 Geospiza fortis Gfo_R007869 I
Gfo_R013682 Geospiza fortis Gfo_R013682 I
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I
Ogr02489 Ophisaurus gracilis Ogr02489 I
Pvit_05813 Pogona vitticeps Pvit_05813 I
Pvit_06470 Pogona vitticeps Pvit_06470 I
Pvit_19093 Pogona vitticeps Pvit_19093 I
Tal_R006208 Tyto alba Tal_R006208 I
Tal_R009020 Tyto alba Tal_R009020 I
fgenesh2_pg.scaffold_137000068 Branchiostoma floridae fgenesh2_pg.scaffold_137000068 I
fgenesh2_pg.scaffold_169000072 Branchiostoma floridae fgenesh2_pg.scaffold_169000072 I
gli2.L Xenopus laevis XB-GENE-17342592 I
gli2.S Xenopus laevis XB-GENE-6251939 I
gli3.L Xenopus laevis XB-GENE-865509 I
XP_002933449 Xenopus tropicalis XP_002933449 I
XP_002933450 Xenopus tropicalis XP_002933450 I