CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000010335
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000010335
T096808_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN
NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.817
0.948
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS
STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.817
0.948
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR
YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.817
0.948
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.770
0.948
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK
MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.770
0.948
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV
BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.770
0.948
GLI3
M10167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.770
0.948
GLI3
M10168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.770
0.948
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.770
0.948
Gli2
M01024_2.00
Mus musculus
NGACCACCYN
NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.764
0.922
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.764
0.922
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.764
0.922
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN
NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.764
0.922
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.764
0.922
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG
CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.764
0.922
GLI2
M10114_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.764
0.922
GLI2
M10115_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.764
0.922
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.764
0.922
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000011077
C2H2 ZF
360
385
TNCHWEGCAQEYDTQDQLVHHINNDH
ENSGMOP00000011077
C2H2 ZF
393
420
FVCRWDECSREQKPFKAQYMLVVHMRRH
ENSGMOP00000011077
C2H2 ZF
426
450
HKCTFEGCAKAYSRLENLKTHLRSH
ENSGMOP00000011077
C2H2 ZF
456
481
YVCEHESCNKAFSNASDRAKHQNRTH
ENSGMOP00000011077
C2H2 ZF
487
512
YVCKISGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLOCG00000002028
Lepisosteus oculatus
ENSLOCG00000002028
I
0.824
ENSONIG00000004472
Oreochromis niloticus
ENSONIG00000004472
I
0.824
ENSPFOG00000014778
Poecilia formosa
ENSPFOG00000014778
I
0.822
ENSONIG00000003608
Oreochromis niloticus
ENSONIG00000003608
I
0.822
gli2a
Danio rerio
ENSDARG00000025641
I
0.820
Gli3
Mus musculus
ENSMUSG00000021318
D
0.817
GLI3
Cavia porcellus
ENSCPOG00000013233
I
0.817
ENSSTOG00000020844
Ictidomys tridecemlineatus
ENSSTOG00000020844
I
0.817
Gli3
Rattus norvegicus
ENSRNOG00000014395
I
0.817
gli2b
Takifugu rubripes
ENSTRUG00000001954
I
0.815
gli2b
Gasterosteus aculeatus
ENSGACG00000001547
I
0.815
gli1
Takifugu rubripes
ENSTRUG00000014998
I
0.814
gli1
Gasterosteus aculeatus
ENSGACG00000006458
I
0.814
ENSGMOG00000007975
Gadus morhua
ENSGMOG00000007975
I
0.814
gli1
Oryzias latipes
ENSORLG00000005455
I
0.812
gli1
Tetraodon nigroviridis
ENSTNIG00000007058
I
0.812
ENSPFOG00000006269
Poecilia formosa
ENSPFOG00000006269
I
0.812
ENSONIG00000005084
Oreochromis niloticus
ENSONIG00000005084
I
0.812
ENSXMAG00000017965
Xiphophorus maculatus
ENSXMAG00000017965
I
0.812
gli2.S
Xenopus laevis
XB-GENE-6251939
I
0.809
fgenesh2_pg.scaffold_169000072
Branchiostoma floridae
fgenesh2_pg.scaffold_169000072
I
0.806
fgenesh2_pg.scaffold_137000068
Branchiostoma floridae
fgenesh2_pg.scaffold_137000068
I
0.806
gli2.L
Xenopus laevis
XB-GENE-17342592
I
0.805
ENSAMXG00000006646
Astyanax mexicanus
ENSAMXG00000006646
I
0.778
Ogr02489
Ophisaurus gracilis
Ogr02489
I
0.778
Pvit_06470
Pogona vitticeps
Pvit_06470
I
0.778
GLI2
Anolis carolinensis
ENSACAG00000004133
I
0.778
gli2b
Takifugu rubripes
ENSTRUG00000010444
I
0.778
gli2b
Danio rerio
ENSDARG00000020884
I
0.778
ENSAMXG00000003125
Astyanax mexicanus
ENSAMXG00000003125
I
0.778
GLI2
Taeniopygia guttata
ENSTGUG00000004599
I
0.776
GLI2
Gallus gallus
ENSGALG00000011630
I
0.776
Brh_R010932
Buceros rhinoceros
Brh_R010932
I
0.776
Gfo_R001212
Geospiza fortis
Gfo_R001212
I
0.776
ENSAPLG00000015141
Anas platyrhynchos
ENSAPLG00000015141
I
0.776
Tal_R006208
Tyto alba
Tal_R006208
I
0.776
ENSPSIG00000008752
Pelodiscus sinensis
ENSPSIG00000008752
I
0.776
Cmyd_10009086
Chelonia mydas
Cmyd_10009086
I
0.776
GLI2
Meleagris gallopavo
ENSMGAG00000011872
I
0.776
ENSFALG00000013217
Ficedula albicollis
ENSFALG00000013217
I
0.776
Aan_R003640
Calypte anna
Aan_R003640
I
0.776
ENSPFOG00000005116
Poecilia formosa
ENSPFOG00000005116
I
0.776
Afo_R006826
Aptenodytes forsteri
Afo_R006826
I
0.776
ENSXMAG00000006443
Xiphophorus maculatus
ENSXMAG00000006443
I
0.776
gli3
Danio rerio
ENSDARG00000052131
I
0.773
GLI3
Otolemur garnettii
ENSOGAG00000012651
I
0.770
ENSPSIG00000017804
Pelodiscus sinensis
ENSPSIG00000017804
I
0.770
GLI3
Ochotona princeps
ENSOPRG00000011225
I
0.770
ENSPPYG00000017613
Pongo abelii
ENSPPYG00000017613
I
0.770
ENSPANG00000014545
Papio anubis
ENSPANG00000014545
I
0.770
GLI3
Procavia capensis
ENSPCAG00000015092
I
0.770
GLI3
Tursiops truncatus
ENSTTRG00000003628
I
0.770
Gfo_R007869
Geospiza fortis
Gfo_R007869
I
0.770
ENSP00000379258
Macaca fascicularis
ENSP00000379258
I
0.770
Pvit_19093
Pogona vitticeps
Pvit_19093
I
0.770
gli3.L
Xenopus laevis
XB-GENE-865509
I
0.770
XP_002933450
Xenopus tropicalis
XP_002933450
I
0.770
XP_002933449
Xenopus tropicalis
XP_002933449
I
0.770
Cmyd_10007839
Chelonia mydas
Cmyd_10007839
I
0.770
Brh_R008256
Buceros rhinoceros
Brh_R008256
I
0.770
ENSSHAG00000009727
Sarcophilus harrisii
ENSSHAG00000009727
I
0.770
GLI3
Pteropus vampyrus
ENSPVAG00000015920
I
0.770
GLI3
Tupaia belangeri
ENSTBEG00000006673
I
0.770
ENSTSYG00000009406
Tarsius syrichta
ENSTSYG00000009406
I
0.770
Afo_R007816
Aptenodytes forsteri
Afo_R007816
I
0.770
Aan_R014715
Calypte anna
Aan_R014715
I
0.770
GLI3
Pan troglodytes
ENSPTRG00000019117
I
0.770
GLI3
Oryctolagus cuniculus
ENSOCUG00000006563
I
0.770
GLI3
Equus caballus
ENSECAG00000009281
I
0.770
ENSMEUG00000013134
Macropus eugenii
ENSMEUG00000013134
I
0.770
GLI3
Meleagris gallopavo
ENSMGAG00000012277
I
0.770
GLI3
Myotis lucifugus
ENSMLUG00000015711
I
0.770
GLI3
Anolis carolinensis
ENSACAG00000017547
I
0.770
GLI3
Dasypus novemcinctus
ENSDNOG00000049286
I
0.770
ENSFALG00000005113
Ficedula albicollis
ENSFALG00000005113
I
0.770
GLI3
Felis catus
ENSFCAG00000011989
I
0.770
GLI3
Loxodonta africana
ENSLAFG00000008944
I
0.770
ENSLACG00000017364
Latimeria chalumnae
ENSLACG00000017364
I
0.770
ENSAMEG00000008405
Ailuropoda melanoleuca
ENSAMEG00000008405
I
0.770
ENSGALG00000012329
Gallus gallus
ENSGALG00000012329
I
0.770
GLI3
Homo sapiens
ENSG00000106571
D
0.770
GLI3
Gorilla gorilla
ENSGGOG00000002026
I
0.770
GLI3
Macaca mulatta
ENSMMUG00000013614
I
0.770
GLI3
Bos taurus
ENSBTAG00000010671
I
0.770
ENSCSAG00000015361
Chlorocebus sabaeus
ENSCSAG00000015361
I
0.770
ENSNLEG00000003160
Nomascus leucogenys
ENSNLEG00000003160
I
0.770
GLI3
Ornithorhynchus anatinus
ENSOANG00000010699
I
0.770
ENSAPLG00000004361
Anas platyrhynchos
ENSAPLG00000004361
I
0.770
ENSAMXG00000002477
Astyanax mexicanus
ENSAMXG00000002477
I
0.770
ENSMPUG00000018143
Mustela putorius furo
ENSMPUG00000018143
I
0.770
GLI3
Monodelphis domestica
ENSMODG00000002714
I
0.770
GLI3
Callithrix jacchus
ENSCJAG00000007690
I
0.770
GLI3
Choloepus hoffmanni
ENSCHOG00000003774
I
0.770
ENSOARG00000017420
Ovis aries
ENSOARG00000017420
I
0.770
GLI3
Canis familiaris
ENSCAFG00000003535
I
0.770
gli2b
Tetraodon nigroviridis
ENSTNIG00000017828
I
0.769
Pvit_05813
Pogona vitticeps
Pvit_05813
I
0.768
GLI1
Anolis carolinensis
ENSACAG00000006541
I
0.768
gli2b
Tetraodon nigroviridis
ENSTNIG00000010251
I
0.767
ENSAPLG00000005128
Anas platyrhynchos
ENSAPLG00000005128
I
0.766
GLI2
Monodelphis domestica
ENSMODG00000000245
I
0.766
Gfo_R013682
Geospiza fortis
Gfo_R013682
I
0.766
Tal_R009020
Tyto alba
Tal_R009020
I
0.766
ENSSHAG00000004233
Sarcophilus harrisii
ENSSHAG00000004233
I
0.766
ENSAMXG00000017236
Astyanax mexicanus
ENSAMXG00000017236
I
0.766
ENSLOCG00000005938
Lepisosteus oculatus
ENSLOCG00000005938
I
0.766
GLI2
Canis familiaris
ENSCAFG00000004821
I
0.764
ENSP00000390436-D1
Bos grunniens
ENSP00000390436-D1
I
0.764
GLI2
Procavia capensis
ENSPCAG00000001704
I
0.764
Myotis_brandtii_Gli2_10019076
Myotis brandtii
Myotis_brandtii_Gli2_10019076
I
0.764
ENSNLEG00000000944
Nomascus leucogenys
ENSNLEG00000000944
I
0.764
ENSOARG00000013052
Ovis aries
ENSOARG00000013052
I
0.764
ENSAMEG00000008708
Ailuropoda melanoleuca
ENSAMEG00000008708
I
0.764
ENSMPUG00000000986
Mustela putorius furo
ENSMPUG00000000986
I
0.764
GLI2
Bos taurus
ENSBTAG00000011682
I
0.764
Gli2
Mus musculus
ENSMUSG00000048402
D
0.764
ENSPANG00000024168
Papio anubis
ENSPANG00000024168
I
0.764
ENSCJAG00000013342
Callithrix jacchus
ENSCJAG00000013342
I
0.764
GLI2
Felis catus
ENSFCAG00000014531
I
0.764
Gli2
Rattus norvegicus
ENSRNOG00000007261
I
0.764
GLI2
Homo sapiens
ENSG00000074047
D
0.764
GLI2
Oryctolagus cuniculus
ENSOCUG00000000638
I
0.764
ENSSTOG00000004582
Ictidomys tridecemlineatus
ENSSTOG00000004582
I
0.764
GLI2
Sus scrofa
ENSSSCG00000015733
I
0.764
ENSMMUP00000002494
Macaca fascicularis
ENSMMUP00000002494
I
0.764
GLI2
Pan troglodytes
ENSPTRG00000012413
I
0.764
ENSCSAG00000016668
Chlorocebus sabaeus
ENSCSAG00000016668
I
0.764
GLI2
Cavia porcellus
ENSCPOG00000015189
I
0.764
GLI2
Macaca mulatta
ENSMMUG00000001868
I
0.764
ENSPPYG00000012778
Pongo abelii
ENSPPYG00000012778
I
0.764
GLI2
Dasypus novemcinctus
ENSDNOG00000008730
I
0.764
ENSLOCG00000011983
Lepisosteus oculatus
ENSLOCG00000011983
I
0.761
GLI2
Gorilla gorilla
ENSGGOG00000009653
I
0.760
GLI2
Otolemur garnettii
ENSOGAG00000032438
I
0.758
ENSGALG00000014639
Gallus gallus
ENSGALG00000014639
I
0.756
ENSMGAG00000003540
Meleagris gallopavo
ENSMGAG00000003540
I
0.756
gli1
Danio rerio
ENSDARG00000101244
I
0.756