PK06103.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK06103.1 T290361_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00		 Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.736 0.851
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.736 0.851
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.736 0.851
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.736 0.851
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.732 0.851
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.723 0.681
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.673 0.723
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.673 0.723
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.664 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02348_2.00 Myb 12 64

DNA Binding Domains

Protein ID Domain From To Sequence
PK06103.1 Myb 12 64

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF384 Homo sapiens ENSG00000126746 D
ENSPPYG00000004196 Pongo abelii ENSPPYG00000004196 I
ENSMPUG00000016838 Mustela putorius furo ENSMPUG00000016838 I
ENSNLEG00000004506 Nomascus leucogenys ENSNLEG00000004506 I
ENSAMEG00000014121 Ailuropoda melanoleuca ENSAMEG00000014121 I
ZNF384 Otolemur garnettii ENSOGAG00000010052 I
ENSONIG00000013041 Oreochromis niloticus ENSONIG00000013041 I
ZNF384 Ochotona princeps ENSOPRG00000003626 I
ENSPANG00000014845 Papio anubis ENSPANG00000014845 I
ZNF384 Procavia capensis ENSPCAG00000012951 I
ENSPFOG00000001513 Poecilia formosa ENSPFOG00000001513 I
ZNF384 Oryctolagus cuniculus ENSOCUG00000003747 I
ZNF384 Pan troglodytes ENSPTRG00000004584 I
ENSSHAG00000015330 Sarcophilus harrisii ENSSHAG00000015330 I
ZNF384 Sus scrofa ENSSSCG00000000702 I
ENSSTOG00000009902 Ictidomys tridecemlineatus ENSSTOG00000009902 I
ENSXMAG00000016787 Xiphophorus maculatus ENSXMAG00000016787 I
Alligator_sinensis_CCG002534.1 Alligator sinensis Alligator_sinensis_CCG002534.1 I
Cmyd_10003951 Chelonia mydas Cmyd_10003951 I
Myotis_brandtii_ZNF384_10009390 Myotis brandtii Myotis_brandtii_ZNF384_10009390 I
ZNF384 Macaca mulatta ENSMMUG00000016990 I
ENSAMXG00000014229 Astyanax mexicanus ENSAMXG00000014229 I
ZNF384 Canis familiaris ENSCAFG00000014740 I
ZNF384 Choloepus hoffmanni ENSCHOG00000006697 I
ZNF384 Callithrix jacchus ENSCJAG00000007944 I
ENSCSAG00000010379 Chlorocebus sabaeus ENSCSAG00000010379 I
ENSFALG00000004741 Ficedula albicollis ENSFALG00000004741 I
ZNF384 Felis catus ENSFCAG00000006882 I
ZNF384 Gorilla gorilla ENSGGOG00000016048 I
ZNF384 Loxodonta africana ENSLAFG00000008381 I
ENSLOCG00000007968 Lepisosteus oculatus ENSLOCG00000007968 I
ZNF384 Myotis lucifugus ENSMLUG00000013771 I
ZNF384 Monodelphis domestica ENSMODG00000018105 I
ENSGMOG00000015258 Gadus morhua ENSGMOG00000015258 N
si:ch211-154o6.2 Oryzias latipes ENSORLG00000012835 N
ENSGALG00000014459 Gallus gallus ENSGALG00000014459 N
znf384l Gasterosteus aculeatus ENSGACG00000001879 N
znf384l Oryzias latipes ENSORLG00000006888 N
znf384l Danio rerio ENSDARG00000001015 N
znf384l Tetraodon nigroviridis ENSTNIG00000000726 N
znf384l Takifugu rubripes ENSTRUG00000004550 N
ENSXMAG00000011034 Xiphophorus maculatus ENSXMAG00000011034 N
ENSONIG00000004947 Oreochromis niloticus ENSONIG00000004947 N
ZNF384 Meleagris gallopavo ENSMGAG00000014101 N