PK06453.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK06453.1 T290364_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00 		Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925 		0.711 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK06453.1 Myb 12 57

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra80938 Phytophthora ramorum Phyra80938 D 0.711
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.711
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I 0.711
Physo132945 Phytophthora sojae Physo132945 I 0.663
maker-pag1_scaffold_151-fgenesh-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.1 I 0.883
Physo132941 Phytophthora sojae Physo132941 I 0.711
fgenesh_scip_prom.46568.8840 Phytophthora kernoviae fgenesh_scip_prom.46568.8840 I 0.881
maker-pve_contig_1017-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_1017-fgenesh-gene-0.2 I 0.708
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.725
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.711
F443_20703 Phytophthora parasitica F443_20703 I 0.711
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.672
PITG_19362 Phytophthora infestans PITG_19362 N 0.730
Physo131337 Phytophthora sojae Physo131337 N 0.686
Physo131312 Phytophthora sojae Physo131312 N 0.742
Physo133514 Phytophthora sojae Physo133514 N 0.664
Physo133517 Phytophthora sojae Physo133517 N 0.664
PITG_11223 Phytophthora infestans PITG_11223 N 0.663
PITG_11731 Phytophthora infestans PITG_11731 N 0.730
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N 0.674
PYU1_G003089 Pythium ultimum PYU1_G003089 N 0.668
PYU1_G003099 Pythium ultimum PYU1_G003099 N 0.687
PYU1_G003104 Pythium ultimum PYU1_G003104 N 0.768
PYU1_G003105 Pythium ultimum PYU1_G003105 N 0.671
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N 0.742
estExt_fgenesh1_pg.C_40260 Phytophthora capsici estExt_fgenesh1_pg.C_40260 N 0.668
fgenesh1_pg.C_scaffold_11000265 Phytophthora capsici fgenesh1_pg.C_scaffold_11000265 N 0.668
maker-par_contig_8833-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8833-fgenesh-gene-0.0 N 0.856
F443_05985 Phytophthora parasitica F443_05985 N 0.670
F443_05992 Phytophthora parasitica F443_05992 N 0.663
F443_16339 Phytophthora parasitica F443_16339 N 0.686
fgenesh_masked-pir_contig_142-abinit-gene-0.47 Pythium irregulare fgenesh_masked-pir_contig_142-abinit-gene-0.47 N 0.671
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N 0.742
fgenesh_scip_prom.28083.3853 Phytophthora lateralis fgenesh_scip_prom.28083.3853 N 0.678
fgenesh_scip_prom.46568.7327 Phytophthora kernoviae fgenesh_scip_prom.46568.7327 N 0.686
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N 0.742
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N 0.687
Phyra73321 Phytophthora ramorum Phyra73321 N 0.678
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N 0.768
maker-pir_contig_524-snap-gene-0.12 Pythium irregulare maker-pir_contig_524-snap-gene-0.12 N 0.686
maker-piw_contig_1647-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1647-fgenesh-gene-0.1 N 0.668
maker-piw_contig_3307-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.0 N 0.768
maker-piw_contig_4506-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_4506-fgenesh-gene-0.0 N 0.676
F443_03220 Phytophthora parasitica F443_03220 N 0.742
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N 0.768
Phyra73305 Phytophthora ramorum Phyra73305 N 0.742