estExt_fgenesh1_kg.C_3051400005 (Phytophthora capsici)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_fgenesh1_kg.C_3051400005 T290794_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00 		Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925 		0.673 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_3051400005 Myb 37 83

Links

Other Myb/SANT family TFs
Other Phytophthora capsici TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra80938 Phytophthora ramorum Phyra80938 D 0.673
Phyra87784 Phytophthora ramorum Phyra87784 I 0.909
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.665
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.726
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.673
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.665
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.678
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.683
PITG_18789 Phytophthora infestans PITG_18789 I 0.909
PITG_14400 Phytophthora infestans PITG_14400 I 0.665
Physo132945 Phytophthora sojae Physo132945 I 0.678
Physo132941 Phytophthora sojae Physo132941 I 0.673
Phyra95260 Phytophthora ramorum Phyra95260 I 0.909
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.665
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.748
maker-piw_contig_50-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.1 I 0.677
F443_08983 Phytophthora parasitica F443_08983 I 0.758
F443_19686 Phytophthora parasitica F443_19686 I 0.909
F443_20671 Phytophthora parasitica F443_20671 I 0.665
F443_20703 Phytophthora parasitica F443_20703 I 0.673
fgenesh_scip_prom.28083.1909 Phytophthora lateralis fgenesh_scip_prom.28083.1909 I 0.909
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.673
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.671
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.726
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.691
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.712
maker-pir_contig_548-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.4 I 0.667
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.665
Physo133517 Phytophthora sojae Physo133517 N 0.669
PITG_11223 Phytophthora infestans PITG_11223 N 0.669
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N 0.677
Physo133514 Phytophthora sojae Physo133514 N 0.669
PYU1_G002826 Pythium ultimum PYU1_G002826 N 0.771
PYU1_G002831 Pythium ultimum PYU1_G002831 N 0.673
PYU1_G002832 Pythium ultimum PYU1_G002832 N 0.670
F443_05992 Phytophthora parasitica F443_05992 N 0.669