PDK_20s13009426g002 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s13009426g002 T291075_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.793 0.830
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.790 0.830
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.719 0.851
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.675 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s13009426g002 Myb 157 207

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARR1 Arabidopsis thaliana AT3G16857 D 0.793
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.719
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.675
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.678
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.719
Bo1g055180 Brassica oleracea Bo1g055180 I 0.790
Bo1g123000 Brassica oleracea Bo1g123000 I 0.807
Bo3g068550 Brassica oleracea Bo3g068550 I 0.793
Bo5g123620 Brassica oleracea Bo5g123620 I 0.793
Bo7g104190 Brassica oleracea Bo7g104190 I 0.730
Bra001643 Brassica rapa Bra001643 I 0.793
Bra012743 Brassica rapa Bra012743 I 0.730
Bra022183 Brassica rapa Bra022183 I 0.793
Bra033527 Brassica rapa Bra033527 I 0.790
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.696
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.704
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.719
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.719
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.719
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.670
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.713
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.719
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.738
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.719
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.719
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.808
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.667
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.701
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.719
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.675
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.719
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.745
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.719
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.678
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.719
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.719
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.719
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.678
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.719
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.717
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.790
SELMODRAFT_150746 Selaginella moellendorffii SELMODRAFT_150746 I 0.699
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.719
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.701
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.701
SELMODRAFT_442188 Selaginella moellendorffii SELMODRAFT_442188 I 0.699
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.674
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.674
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.719
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.719
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.719
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.719
TCM_011067 Theobroma cacao TCM_011067 I 0.719
TCM_021300 Theobroma cacao TCM_021300 I 0.719
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.719
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.719
VIT_07s0005g01010 Vitis vinifera VIT_07s0005g01010 I 0.677
Ca_02989 Cicer arietinum Ca_02989 I 0.719
Ca_09080 Cicer arietinum Ca_09080 I 0.678
Ca_14780 Cicer arietinum Ca_14780 I 0.685
Ca_15151 Cicer arietinum Ca_15151 I 0.719
Cla009424 Citrullus lanatus Cla009424 I 0.719
Cla022101 Citrullus lanatus Cla022101 I 0.719
Pm005877 Prunus mume Pm005877 I 0.717
27647.m000179 Ricinus communis 27647.m000179 I 0.719
29848.m004559 Ricinus communis 29848.m004559 I 0.738
29889.m003245 Ricinus communis 29889.m003245 I 0.719
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.745
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.719
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.745
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.719
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.745
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.675
e_gw1.16.93.1 Physcomitrella patens e_gw1.16.93.1 I 0.745
e_gw1.42.55.1 Physcomitrella patens e_gw1.42.55.1 I 0.691
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.696
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.811
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.693
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.691
mgf010113m Mimulus guttatus mgf010113m I 0.717
mgf012203m Mimulus guttatus mgf012203m I 0.717
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.719
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.719
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.772
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.793
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.790
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.790
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.683
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.793
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.790
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.793
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.683
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.719
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.715
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.719
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.748
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.693
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.719
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.719
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.719
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.719
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.719
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.737
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.719
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.719
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.704
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.719
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.678
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.808
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.808
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.678
MDP0000124301 Malus domestica MDP0000124301 I 0.719
MDP0000155328 Malus domestica MDP0000155328 I 0.719
MDP0000224740 Malus domestica MDP0000224740 I 0.719
MDP0000290818 Malus domestica MDP0000290818 I 0.719
MDP0000311914 Malus domestica MDP0000311914 I 0.721
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.715
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.719
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.719
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.678
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.678
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.679
Thhalv10020213m.g Eutrema salsugineum Thhalv10020213m.g I 0.793
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.790
PK26059.1 Cannabis sativa PK26059.1 I 0.719
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.668
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.667
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.716
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.739
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.797