L596_g10973 (Steinernema carpocapsae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 L596_g10973 T291608_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.838 0.913
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.790 0.870
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.790 0.870
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g10973.t1 Myb 8 54
L596_g10973.t1 Myb 60 104

Links

Other Myb/SANT family TFs
Other Steinernema carpocapsae TFs

569 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G04200 Glycine max GLYMA15G04200 I
Thhalv10012893m.g Eutrema salsugineum Thhalv10012893m.g I
SapurV1A.0041s0150 Salix purpurea SapurV1A.0041s0150 I
SapurV1A.0040s0420 Salix purpurea SapurV1A.0040s0420 I
Gorai.009G098300 Gossypium raimondii Gorai.009G098300 I
Gorai.006G172000 Gossypium raimondii Gorai.006G172000 I
Gorai.003G130700 Gossypium raimondii Gorai.003G130700 I
Si034524m.g Setaria italica Si034524m.g I
PGSC0003DMG400023432 Solanum tuberosum PGSC0003DMG400023432 I
OBART02G37370 Oryza barthii OBART02G37370 I
GLYMA13G41210 Glycine max GLYMA13G41210 I
estExt_fgenesh1_pg.C_1140084 Physcomitrella patens estExt_fgenesh1_pg.C_1140084 N
Traes_3DL_FCD561E40 Triticum aestivum Traes_3DL_FCD561E40 N
Lus10016527.g Linum usitatissimum Lus10016527.g N
Lus10040795.g Linum usitatissimum Lus10040795.g N
MDP0000119092 Malus domestica MDP0000119092 N
MDP0000138764 Malus domestica MDP0000138764 N
MDP0000222004 Malus domestica MDP0000222004 N
PDK_20s1300944g001 Phoenix dactylifera PDK_20s1300944g001 N