Bra024263 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra024263 T292619_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.927 0.798
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.927 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024263.1-P NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac103 Arabidopsis thaliana AT5G64060 D 0.927
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.903
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.903
evm.TU.supercontig_42.145 Carica papaya evm.TU.supercontig_42.145 I 0.873
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.903
Carubv10026643m.g Capsella rubella Carubv10026643m.g I 0.940
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.969
Aquca_022_00282 Aquilegia coerulea Aquca_022_00282 I 0.910
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.931
Bostr.0568s0398 Boechera stricta Bostr.0568s0398 I 0.950
Bra028640 Brassica rapa Bra028640 I 0.895
Cagra.0248s0087 Capsella grandiflora Cagra.0248s0087 I 0.940
Bo3g101690 Brassica oleracea Bo3g101690 I 0.971
Bo2g009300 Brassica oleracea Bo2g009300 I 0.881
Ciclev10001200m.g Citrus clementina Ciclev10001200m.g N 0.912
PDK_20s1369501g001 Phoenix dactylifera PDK_20s1369501g001 N 0.882
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.885
gene27615-v1.0-hybrid Fragaria vesca gene27615-v1.0-hybrid N 0.895
Lus10020896.g Linum usitatissimum Lus10020896.g N 0.872
orange1.1g036240m.g Citrus sinensis orange1.1g036240m.g N 0.912
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.913
PK02804.1 Cannabis sativa PK02804.1 N 0.881
LjSGA_024981.1 Lotus japonicus LjSGA_024981.1 N 0.886
NAC082 Arabidopsis thaliana AT5G09330 N 0.900
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.885
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.908
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.908
30136.m001048 Ricinus communis 30136.m001048 N 0.917
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.875
POPTR_0005s06040 Populus trichocarpa POPTR_0005s06040 N 0.886
GSMUA_Achr7G23330_001 Musa acuminata GSMUA_Achr7G23330_001 N 0.884
GSMUA_Achr11G09000_001 Musa acuminata GSMUA_Achr11G09000_001 N 0.896
GSMUA_Achr10G04530_001 Musa acuminata GSMUA_Achr10G04530_001 N 0.882
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.905
Bra009379 Brassica rapa Bra009379 N 0.882
Bo3g005150 Brassica oleracea Bo3g005150 N 0.885