Bra035896 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra035896 T292685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC101
M07241_2.00 		Arabidopsis thaliana
TGCKTVNDNHNYAMG
CKTRNDNHNBAMGCA		 Dap-seq
OMalley et al.(2016)
VND6_colamp_a 		0.995 0.982
NAC101
M07242_2.00 		Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN
NDWDRCKTRNNNHDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND6_col_v31 		0.995 0.982
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.882 0.570
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.882 0.570
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.882 0.570
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.871 0.518
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra035896.1-P NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp746 Mus musculus ENSMUSG00000057691 N
Myotis_brandtii_ZNF746_10025634 Myotis brandtii Myotis_brandtii_ZNF746_10025634 N
ZNF746 Tursiops truncatus ENSTTRG00000002642 N
ENSTBEG00000001361 Tupaia belangeri ENSTBEG00000001361 N
ENSSTOG00000021079 Ictidomys tridecemlineatus ENSSTOG00000021079 N
ENSSSCG00000016776 Sus scrofa ENSSSCG00000016776 N
Zfp746 Rattus norvegicus ENSRNOG00000007064 N
ZNF746 Pteropus vampyrus ENSPVAG00000010875 N
ZNF746 Pan troglodytes ENSPTRG00000028361 N
ENSPANG00000017316 Papio anubis ENSPANG00000017316 N
ZNF746 Ochotona princeps ENSOPRG00000010592 N
ZNF746 Otolemur garnettii ENSOGAG00000028106 N
ZNF746 Oryctolagus cuniculus ENSOCUG00000008431 N
ZNF746 Bos taurus ENSBTAG00000031106 N
ENSMMUG00000018707 Macaca mulatta ENSMMUG00000018707 N
ZNF746 Myotis lucifugus ENSMLUG00000017109 N
ZNF746 Microcebus murinus ENSMICG00000006405 N
ZNF746 Loxodonta africana ENSLAFG00000006725 N
ZNF746 Gorilla gorilla ENSGGOG00000015841 N
ZNF746 Homo sapiens ENSG00000181220 N
Zfp746 Dipodomys ordii ENSDORG00000006388 N
ZNF746 Dasypus novemcinctus ENSDNOG00000040375 N
ENSCSAG00000006985 Chlorocebus sabaeus ENSCSAG00000006985 N
ENSCPOG00000012471 Cavia porcellus ENSCPOG00000012471 N
ZNF746 Callithrix jacchus ENSCJAG00000010276 N
ZNF746 Choloepus hoffmanni ENSCHOG00000005920 N